RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ADGRA3Q8IWK6 1321 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 ZNF318Q5VUA4 2279 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 H3BRB1 525 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 PER2O15055 1255 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 EIF3JO75822 258 aaKnown RBP8.03□□□□□ -1.12
HDAC1-204ENST00000471488 RB1P06400 928 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 PDHBP11177 359 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 MS4A1P11836 297 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 CA8P35219 290 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 ZNF543Q08ER8 600 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 ADAM15Q13444 863 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 CDC37Q16543 378 aaPredicted RBP8.03□□□□□ -1.12
HDAC1-204ENST00000471488 CTC1Q2NKJ3 1217 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 HSDL1Q3SXM5 330 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 BTNL9Q6UXG8 535 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 BMP8AQ7Z5Y6 402 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 MCF2L2Q86YR7 1114 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 KCNG4Q8TDN1 519 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 SYTL5Q8TDW5 730 aaPredicted RBP8.03□□□□□ -1.12
HDAC1-204ENST00000471488 LMAN2LQ9H0V9 348 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 MFSD1Q9H3U5 465 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 TUT1Q9H6E5 874 aaKnown RBP8.03□□□□□ -1.12
HDAC1-204ENST00000471488 TLE6Q9H808 572 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 SUPT16HQ9Y5B9 1047 aaKnown RBP8.03□□□□□ -1.12
HDAC1-204ENST00000471488 PCDHGC5Q9Y5F6 944 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 ZFHX2Q9C0A1 2572 aaPredicted RBP8.03□□□□□ -1.12
HDAC1-204ENST00000471488 ABCB11O95342 1321 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 CCDC171Q6TFL3 1326 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 TECTAO75443 2155 aa8.03□□□□□ -1.12
HDAC1-204ENST00000471488 TRIM6-TRIM34B2RNG4 842 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 HAS3O00219 553 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 PPFIA4O75335 1185 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 MMP1P03956 469 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 NR3C2P08235 984 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 HOXA13P31271 388 aaPredicted RBP8.02□□□□□ -1.13
HDAC1-204ENST00000471488 RBM10P98175 930 aaKnown RBP8.02□□□□□ -1.13
HDAC1-204ENST00000471488 CELF3Q5SZQ8 465 aaKnown RBP8.02□□□□□ -1.13
HDAC1-204ENST00000471488 VPS53Q5VIR6 699 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 LLGL2Q6P1M3 1020 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 FRMD5Q7Z6J6 570 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 FCHSD1Q86WN1 690 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 POF1BQ8WVV4 589 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 APBB2Q92870 758 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 IWS1Q96ST2 819 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 PHF7Q9BWX1 381 aaPredicted RBP8.02□□□□□ -1.13
HDAC1-204ENST00000471488 RNPEPQ9H4A4 650 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 PXMP2Q9NR77 195 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 PLAGL2Q9UPG8 496 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 MRPL11Q9Y3B7 192 aaKnown RBP8.02□□□□□ -1.13
HDAC1-204ENST00000471488 MYO7AQ13402 2215 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 WDR19Q8NEZ3 1342 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 COL4A6Q14031 1691 aa8.02□□□□□ -1.13
HDAC1-204ENST00000471488 MYH7BA7E2Y1 1941 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 LOC730098B7Z3J9 87 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 C5orf67F2Z3F1 127 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 RGS20O76081 388 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 LGALS2P05162 132 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 ITGB1P05556 798 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 HSPD1P10809 573 aaKnown RBP8.01□□□□□ -1.13
HDAC1-204ENST00000471488 GNAT1P11488 350 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 UBA1P22314 1058 aaKnown RBP8.01□□□□□ -1.13
HDAC1-204ENST00000471488 DNAJB1P25685 340 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 COL19A1Q14993 1142 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 QRICH1Q2TAL8 776 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 ZMYM1Q5SVZ6 1142 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 GPATCH4Q5T3I0 446 aaKnown RBP8.01□□□□□ -1.13
HDAC1-204ENST00000471488 MYSM1Q5VVJ2 828 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 TRIM50Q86XT4 487 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 ADGRF4Q8IZF3 695 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 ADSSL1Q8N142 457 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 KLHL23Q8NBE8 558 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 SMRP1Q8NCR6 262 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 GPKOWQ92917 476 aaPredicted RBP eCLIP8.01□□□□□ -1.135e-7■■□□□ 13
HDAC1-204ENST00000471488 NKD2Q969F2 451 aaPredicted RBP8.01□□□□□ -1.13
HDAC1-204ENST00000471488 MSLNLQ96KJ4 702 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 HINFPQ9BQA5 517 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 KAT14Q9H8E8 782 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 ZBTB40Q9NUA8 1239 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 CLEC1BQ9P126 229 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 LRFN2Q9ULH4 789 aa8.01□□□□□ -1.13
HDAC1-204ENST00000471488 MRPL42Q9Y6G3 142 aaKnown RBP8.01□□□□□ -1.13
HDAC1-204ENST00000471488 RALGAPA2Q2PPJ7 1873 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 KMT2EQ8IZD2 1858 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 PRR23AA6NEV1 266 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 GALR2O43603 387 aaPredicted RBP8□□□□□ -1.13
HDAC1-204ENST00000471488 ORC4O43929 436 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 MARK3P27448 753 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 TECP42680 631 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 IGBP1P78318 339 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 PTPN21Q16825 1174 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 MFSD6Q6ZSS7 791 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 CYFIP1Q7L576 1253 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 EFHBQ8N7U6 833 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 RGS22Q8NE09 1264 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 EMID1Q96A84 441 aaPredicted RBP8□□□□□ -1.13
HDAC1-204ENST00000471488 ASIC4Q96FT7 647 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 RIPOR3Q96MK2 946 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 NEK1Q96PY6 1258 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 C16orf70Q9BSU1 422 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 FAM49AQ9H0Q0 323 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms