RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FAM227BQ96M60 508 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 NECAB3Q96P71 396 aaPredicted RBP10.64□□□□□ -0.71
CPSF4-211ENST00000471455 RMDN3Q96TC7 470 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 TMUB1Q9BVT8 246 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 GTF2IRD1Q9UHL9 959 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 MRVI1Q9Y6F6 885 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 TCF20Q9UGU0 1960 aaKnown RBP10.63□□□□□ -0.71
CPSF4-211ENST00000471455 RFXAPO00287 272 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 ZNF213O14771 459 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 ACTN4O43707 911 aaKnown RBP10.63□□□□□ -0.71
CPSF4-211ENST00000471455 EIF3JO75822 258 aaKnown RBP10.63□□□□□ -0.71
CPSF4-211ENST00000471455 ARIH2O95376 493 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 CXCL10P02778 98 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 ARHGAP1Q07960 439 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 TRAF1Q13077 416 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 NMIQ13287 307 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-211ENST00000471455 PTK7Q13308 1070 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 IKBKEQ14164 716 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 TMEM31Q5JXX7 168 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 GDF6Q6KF10 455 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-211ENST00000471455 KCNV1Q6PIU1 500 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 BLOC1S3Q6QNY0 202 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 FBXO11Q86XK2 927 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 PPTC7Q8NI37 304 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 SYTL5Q8TDW5 730 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-211ENST00000471455 TGS1Q96RS0 853 aaKnown RBP10.63□□□□□ -0.71
CPSF4-211ENST00000471455 RAD9AQ99638 391 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 IL21Q9HBE4 155 aa10.63□□□□□ -0.71
CPSF4-211ENST00000471455 EPOPA6NHQ4 379 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 HIP1O00291 1037 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 GJB5O95377 273 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 F2P00734 622 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 PARP1P09874 1014 aaKnown RBP10.62□□□□□ -0.71
CPSF4-211ENST00000471455 GOLGA8HP0CJ92 632 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 COPS2P61201 443 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 HDAC1Q13547 482 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-211ENST00000471455 LY6KQ17RY6 165 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 ZNF589Q86UQ0 364 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-211ENST00000471455 TBC1D10CQ8IV04 446 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 DHX37Q8IY37 1157 aaKnown RBP10.62□□□□□ -0.71
CPSF4-211ENST00000471455 SAMD3Q8N6K7 520 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 MAP3K20Q9NYL2 800 aaKnown RBP10.62□□□□□ -0.71
CPSF4-211ENST00000471455 CHD7Q9P2D1 2997 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 BRWD1Q9NSI6 2320 aa10.62□□□□□ -0.71
CPSF4-211ENST00000471455 TET1Q8NFU7 2136 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 NEDD4P46934 1319 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 COL4A4P53420 1690 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-211ENST00000471455 KDM4AO75164 1064 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 AMHP03971 560 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 CKBP12277 381 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 EIF2AK2P19525 551 aaKnown RBP10.61□□□□□ -0.71
CPSF4-211ENST00000471455 ERVK-21P61565 698 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 AAMPQ13685 434 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 PTPROQ16827 1216 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 KIAA0753Q2KHM9 967 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 QRICH1Q2TAL8 776 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 ADGRF4Q8IZF3 695 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 GDPD5Q8WTR4 605 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 ANKS1AQ92625 1134 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 KAT2BQ92831 832 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 RILPL2Q969X0 211 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 TAAR1Q96RJ0 339 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 ZSCAN10Q96SZ4 725 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-211ENST00000471455 UBAC1Q9BSL1 405 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 ALG1Q9BT22 464 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 REPIN1Q9BWE0 567 aaKnown RBP10.61□□□□□ -0.71
CPSF4-211ENST00000471455 AMNQ9BXJ7 453 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 KRT23Q9C075 422 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 UBA5Q9GZZ9 404 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 CNNM2Q9H8M5 875 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 DIAPH3Q9NSV4 1193 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 HDAC6Q9UBN7 1215 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 CTNNA3Q9UI47 895 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 DDX41Q9UJV9 622 aaKnown RBP10.61□□□□□ -0.71
CPSF4-211ENST00000471455 INSL6Q9Y581 213 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 TRIP12Q14669 1992 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-211ENST00000471455 LAMA4Q16363 1823 aa10.61□□□□□ -0.71
CPSF4-211ENST00000471455 KIAA1217Q5T5P2 1943 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 DDX11L8A8MPP1 907 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 LPXNO60711 386 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 PPFIA4O75335 1185 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 LGR5O75473 907 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 CFBP00751 764 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 NR3C2P08235 984 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 RRP1P56182 461 aaKnown RBP10.6□□□□□ -0.71
CPSF4-211ENST00000471455 DEFB103AP81534 67 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 IMMTQ16891 758 aaKnown RBP10.6□□□□□ -0.71
CPSF4-211ENST00000471455 PUS10Q3MIT2 529 aaKnown RBP10.6□□□□□ -0.71
CPSF4-211ENST00000471455 KRT40Q6A162 431 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 PPP1R13LQ8WUF5 828 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 DHX38Q92620 1227 aaKnown RBP10.6□□□□□ -0.71
CPSF4-211ENST00000471455 SAMD11Q96NU1 681 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 ZKSCAN3Q9BRR0 538 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 PXMP2Q9NR77 195 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 RAPGEFL1Q9UHV5 662 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 PCDHB3Q9Y5E6 796 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 TRANK1O15050 2925 aa10.6□□□□□ -0.71
CPSF4-211ENST00000471455 PIEZO1Q92508 2521 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 MYH6P13533 1939 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms