RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 METTL7BQ6UX53 244 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 LRRC8DQ7L1W4 858 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 CAGE1Q8TC20 777 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 AFAP1L1Q8TED9 768 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 PGBD1Q96JS3 809 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 GPR20Q99678 358 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 MSRAQ9UJ68 235 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 GOLGA8AA7E2F4 631 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 GOLGA8BA8MQT2 603 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 DLL1O00548 723 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 ATP9AO75110 1047 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 STAM2O75886 525 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 ARHGEF15O94989 841 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 ITGB5P18084 799 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 RBL2Q08999 1139 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 ADGRE1Q14246 886 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 MBTPS1Q14703 1052 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 ZNF618Q5T7W0 954 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 SYNE3Q6ZMZ3 975 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 TMCO2Q7Z6W1 182 aaPredicted RBP17.65■□□□□ 0.42
COL1A1-203ENST00000471344 CCDC155Q8N6L0 562 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 PKD2L1Q9P0L9 805 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 SNX14Q9Y5W7 946 aa17.65■□□□□ 0.42
COL1A1-203ENST00000471344 CUL9Q8IWT3 2517 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 XIRP2A4UGR9 3374 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 H3BRB1 525 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 NOP56O00567 594 aaKnown RBP17.64■□□□□ 0.41
COL1A1-203ENST00000471344 SMIM10L2AP0DMW4 78 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 SMIM10L2BP0DMW5 78 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 APOBRQ0VD83 1088 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 PTK7Q13308 1070 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 NEDD9Q14511 834 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 UTP14CQ5TAP6 766 aaKnown RBP17.64■□□□□ 0.41
COL1A1-203ENST00000471344 KCNB2Q92953 911 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 JAKMIP1Q96N16 626 aaKnown RBP17.64■□□□□ 0.41
COL1A1-203ENST00000471344 TUT1Q9H6E5 874 aaKnown RBP17.64■□□□□ 0.41
COL1A1-203ENST00000471344 RBM28Q9NW13 759 aaKnown RBP17.64■□□□□ 0.41
COL1A1-203ENST00000471344 NAP1L2Q9ULW6 460 aaPredicted RBP17.64■□□□□ 0.41
COL1A1-203ENST00000471344 PCDHA6Q9UN73 950 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 PCDHA8Q9Y5H6 950 aa17.64■□□□□ 0.41
COL1A1-203ENST00000471344 STXBP3O00186 592 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 ADAMTS3O15072 1205 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
COL1A1-203ENST00000471344 CA3P07451 260 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 ACTN1P12814 892 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 KCNA2P16389 499 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 HOXC8P31273 242 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 KRT32Q14532 448 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 PPP2R2DQ66LE6 453 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 SPRED2Q7Z698 418 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 OSBPL7Q9BZF2 842 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 SLC28A3Q9HAS3 691 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 PCDHA11Q9Y5I1 949 aa17.63■□□□□ 0.41
COL1A1-203ENST00000471344 V9GY48 417 aaPredicted RBP17.63■□□□□ 0.41
COL1A1-203ENST00000471344 MYO9BQ13459 2157 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 C17orf102A2RUQ5 167 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 SPDYE3A6NKU9 549 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 TREHO43280 583 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 CXCL10P02778 98 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 HSPA4P34932 840 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 ADD1P35611 737 aaKnown RBP17.62■□□□□ 0.41
COL1A1-203ENST00000471344 NAPAP54920 295 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 WDR5P61964 334 aaKnown RBP17.62■□□□□ 0.41
COL1A1-203ENST00000471344 DEFB103AP81534 67 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 XRRA1Q6P2D8 792 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 Q6ZUG5 572 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 NLRX1Q86UT6 975 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 SERINC5Q86VE9 423 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 RNPEPQ9H4A4 650 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 CERS4Q9HA82 394 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 PRDM6Q9NQX0 595 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 TMEM260Q9NX78 707 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 UBIAD1Q9Y5Z9 338 aa17.62■□□□□ 0.41
COL1A1-203ENST00000471344 PPFIA3O75145 1194 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 THPOP40225 353 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 HERC6Q8IVU3 1022 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 CYP2W1Q8TAV3 490 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 BRF1Q92994 677 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 ATP6V0A1Q93050 837 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 GPRASP2Q96D09 838 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 SLC9A7Q96T83 725 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 GAS2L1Q99501 681 aaPredicted RBP17.61■□□□□ 0.41
COL1A1-203ENST00000471344 SENP7Q9BQF6 1050 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 USP26Q9BXU7 913 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 RIC8AQ9NPQ8 531 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 SETD4Q9NVD3 440 aa17.61■□□□□ 0.41
COL1A1-203ENST00000471344 EPOPA6NHQ4 379 aa17.6■□□□□ 0.41
COL1A1-203ENST00000471344 RFXAPO00287 272 aa17.6■□□□□ 0.41
COL1A1-203ENST00000471344 CTSHP09668 335 aa17.6■□□□□ 0.41
COL1A1-203ENST00000471344 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
COL1A1-203ENST00000471344 MTMR1Q13613 665 aa17.6■□□□□ 0.41
COL1A1-203ENST00000471344 CNKSR3Q6P9H4 555 aa17.6■□□□□ 0.41
COL1A1-203ENST00000471344 COL25A1Q9BXS0 654 aaPredicted RBP17.6■□□□□ 0.41
COL1A1-203ENST00000471344 SIP14410 1827 aa17.6■□□□□ 0.41
COL1A1-203ENST00000471344 COL4A4P53420 1690 aaPredicted RBP17.59■□□□□ 0.41
COL1A1-203ENST00000471344 GSTTP1A0A1W2PQM5 241 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 BAIAP3O94812 1187 aa17.59■□□□□ 0.41
COL1A1-203ENST00000471344 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms