RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 FAM184AQ8NB25 1140 aa22.48■■□□□ 1.19
HDAC7-220ENST00000471235 TNFRSF25Q93038 417 aa22.48■■□□□ 1.19
HDAC7-220ENST00000471235 C8orf76Q96K31 380 aa22.48■■□□□ 1.19
HDAC7-220ENST00000471235 AGO4Q9HCK5 861 aaKnown RBP22.48■■□□□ 1.19
HDAC7-220ENST00000471235 BRMS1Q9HCU9 246 aa22.48■■□□□ 1.19
HDAC7-220ENST00000471235 ATP11BQ9Y2G3 1177 aa22.48■■□□□ 1.19
HDAC7-220ENST00000471235 TELO2Q9Y4R8 837 aa22.48■■□□□ 1.19
HDAC7-220ENST00000471235 CCDC194A0A1B0GVG4 234 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 MAFGO15525 162 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 SETQ01105 290 aaPredicted RBP22.47■■□□□ 1.19
HDAC7-220ENST00000471235 NR5A1Q13285 461 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 DGKDQ16760 1214 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 INF2Q27J81 1249 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 DIS3L2Q8IYB7 885 aaKnown RBP22.47■■□□□ 1.19
HDAC7-220ENST00000471235 GIMAP8Q8ND71 665 aaPredicted RBP22.47■■□□□ 1.19
HDAC7-220ENST00000471235 VTI1AQ96AJ9 217 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 LENG9Q96B70 501 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 GRIN2DO15399 1336 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 TANC1Q9C0D5 1861 aa22.47■■□□□ 1.19
HDAC7-220ENST00000471235 CEP290O15078 2479 aa22.46■■□□□ 1.19
HDAC7-220ENST00000471235 FAM205CA6NFA0 338 aa22.46■■□□□ 1.19
HDAC7-220ENST00000471235 ZNF286BP0CG31 522 aa22.46■■□□□ 1.19
HDAC7-220ENST00000471235 USP11P51784 963 aa22.46■■□□□ 1.19
HDAC7-220ENST00000471235 ITGB3BPQ13352 177 aaPredicted RBP22.46■■□□□ 1.19
HDAC7-220ENST00000471235 EARS2Q5JPH6 523 aaKnown RBP22.46■■□□□ 1.19
HDAC7-220ENST00000471235 GPR20Q99678 358 aa22.46■■□□□ 1.19
HDAC7-220ENST00000471235 NFASCO94856 1347 aa22.46■■□□□ 1.19
HDAC7-220ENST00000471235 ARVCFO00192 962 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 NOP56O00567 594 aaKnown RBP22.45■■□□□ 1.18
HDAC7-220ENST00000471235 TDP2O95551 362 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 SP4Q02446 784 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 CUL4AQ13619 759 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 ITGA7Q13683 1181 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 PRR16Q569H4 304 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 PIK3AP1Q6ZUJ8 805 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 SLC43A3Q8NBI5 491 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 KAT2BQ92831 832 aa22.45■■□□□ 1.18
HDAC7-220ENST00000471235 BTBD18B2RXH4 712 aa22.44■■□□□ 1.18
HDAC7-220ENST00000471235 PQBP1O60828 265 aaKnown RBP22.44■■□□□ 1.18
HDAC7-220ENST00000471235 F2P00734 622 aa22.44■■□□□ 1.18
HDAC7-220ENST00000471235 CDK7P50613 346 aa22.44■■□□□ 1.18
HDAC7-220ENST00000471235 TLE2Q04725 743 aa22.44■■□□□ 1.18
HDAC7-220ENST00000471235 JPH1Q9HDC5 661 aaPredicted RBP22.44■■□□□ 1.18
HDAC7-220ENST00000471235 NR2E3Q9Y5X4 410 aa22.44■■□□□ 1.18
HDAC7-220ENST00000471235 MROH7Q68CQ1 1323 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 LGALS2P05162 132 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 GJB2P29033 226 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 MOXD1Q6UVY6 613 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 ANKRD33Q7Z3H0 272 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 NEK8Q86SG6 692 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 FBXO18Q8NFZ0 1043 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 PPP1R13LQ8WUF5 828 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 MBOAT7Q96N66 472 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 UIMC1Q96RL1 719 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 SDF4Q9BRK5 362 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 MYH15Q9Y2K3 1946 aa22.43■■□□□ 1.18
HDAC7-220ENST00000471235 CYP3A7-CYP3A51PA0A087WV96 503 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 H0YGN5 161 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 PPFIA4O75335 1185 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 CYP3A7P24462 503 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 SAFBQ15424 915 aaKnown RBP eCLIP22.42■■□□□ 1.18
HDAC7-220ENST00000471235 NBPF20Q3BBV1 942 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 FAM126BQ8IXS8 530 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 ZNF577Q9BSK1 485 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 C16orf70Q9BSU1 422 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 PDLIM7Q9NR12 457 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 SLC9A2Q9UBY0 812 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 ZMYND8Q9ULU4 1186 aaPredicted RBP22.42■■□□□ 1.18
HDAC7-220ENST00000471235 SMC3Q9UQE7 1217 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 KIF3AQ9Y496 699 aa22.42■■□□□ 1.18
HDAC7-220ENST00000471235 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.42■■□□□ 1.18
HDAC7-220ENST00000471235 GSTTP1A0A1W2PQM5 241 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 K7ELQ4 463 aaPredicted RBP22.41■■□□□ 1.18
HDAC7-220ENST00000471235 DDX39AO00148 427 aaKnown RBP22.41■■□□□ 1.18
HDAC7-220ENST00000471235 IPO5O00410 1097 aaKnown RBP22.41■■□□□ 1.18
HDAC7-220ENST00000471235 PSEN2P49810 448 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 MFSD10Q14728 455 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 LETM2Q2VYF4 491 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 Q4G0T1 1027 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 TRIM50Q86XT4 487 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 SNX21Q969T3 373 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 TOX2Q96NM4 488 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 KATNAL1Q9BW62 490 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 SEZ6LQ9BYH1 1024 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 PCDH10Q9P2E7 1040 aa22.41■■□□□ 1.18
HDAC7-220ENST00000471235 HAS3O00219 553 aa22.4■■□□□ 1.18
HDAC7-220ENST00000471235 MSH4O15457 936 aa22.4■■□□□ 1.18
HDAC7-220ENST00000471235 DHX15O43143 795 aaKnown RBP22.4■■□□□ 1.18
HDAC7-220ENST00000471235 SLC37A4O43826 429 aa22.4■■□□□ 1.18
HDAC7-220ENST00000471235 SYN1P17600 705 aa22.4■■□□□ 1.18
HDAC7-220ENST00000471235 TCF7P36402 384 aaPredicted RBP22.4■■□□□ 1.18
HDAC7-220ENST00000471235 CHMP4BP1P59074 171 aa22.4■■□□□ 1.18
HDAC7-220ENST00000471235 NFRKBQ6P4R8 1299 aa22.4■■□□□ 1.18
HDAC7-220ENST00000471235 DCDC2CA8MYV0 355 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 CCNE2O96020 404 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 CLTBP09497 229 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 GCFC2P16383 781 aaKnown RBP22.39■■□□□ 1.17
HDAC7-220ENST00000471235 ACTR2P61160 394 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 FAAP100Q0VG06 881 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 KIAA0753Q2KHM9 967 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms