RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 PFKFB3Q16875 520 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 ARL6IP4Q66PJ3 421 aaKnown RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 C17orf99Q6UX52 265 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 C16orf86Q6ZW13 317 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 MIGA2Q7L4E1 593 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 PLA2G4DQ86XP0 818 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 ZSCAN29Q8IWY8 852 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 SCYL3Q8IZE3 742 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 ZNF444Q8N0Y2 327 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 DAGLBQ8NCG7 672 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 ZNF384Q8TF68 577 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 NUP133Q8WUM0 1156 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 CCDC97Q96F63 343 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 PRIMPOLQ96LW4 560 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 PARK7Q99497 189 aaKnown RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 SPZ1Q9BXG8 430 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 OSBPL5Q9H0X9 879 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 DNAJC25Q9H1X3 360 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 GOLPH3LQ9H4A5 285 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 ETNK1Q9HBU6 452 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 PICK1Q9NRD5 415 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 SPTLC3Q9NUV7 552 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 SWAP70Q9UH65 585 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 SRPRBQ9Y5M8 271 aaKnown RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 LAMB1P07942 1786 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 ATRNL1Q5VV63 1379 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 COL2A1P02458 1487 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 A0A0G2JLL6 359 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 PALM3A6NDB9 673 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 PHF20L1A8MW92 1017 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 PDHXO00330 501 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 PPFIA3O75145 1194 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 SMC2O95347 1197 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 TUBB4AP04350 444 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 INHAP05111 366 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 TSPY3P0CV98 308 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 TSPY8P0CW00 308 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 TXLNAP40222 546 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 ZNF75DP51815 510 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 RHBDL3P58872 404 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 DYNLL1P63167 89 aaKnown RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 LACTBP83111 547 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 GRM4Q14833 912 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 NT5DC1Q5TFE4 455 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 TAS1R3Q7RTX0 852 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 PRRT2Q7Z6L0 340 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 LUZP1Q86V48 1076 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 CCDC155Q8N6L0 562 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 MLKLQ8NB16 471 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 CCDC150Q8NCX0 1101 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 CNNM3Q8NE01 707 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 NEDD1Q8NHV4 660 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 PPP1R12CQ9BZL4 782 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 TRIM5Q9C035 493 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 FTOQ9C0B1 505 aaKnown RBP eCLIP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 DHX36Q9H2U1 1008 aaKnown RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 MAGEF1Q9HAY2 307 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 MKNK2Q9HBH9 465 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 GINM1Q9NU53 330 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 SERTAD1Q9UHV2 236 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 HERC5Q9UII4 1024 aaKnown RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 FBXO2Q9UK22 296 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 KCNH3Q9ULD8 1083 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 SYNPO2Q9UMS6 1093 aa6.42□□□□□ -1.38
HDAC8-216ENST00000470998 MAFBQ9Y5Q3 323 aaPredicted RBP6.42□□□□□ -1.38
HDAC8-216ENST00000470998 A0A1B0GVL5 298 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 ESYT2A0FGR8 921 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 CDC14CA4D256 554 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 DDTLA6NHG4 134 aaPredicted RBP6.41□□□□□ -1.38
HDAC8-216ENST00000470998 BTBD18B2RXH4 712 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 H3BM21 787 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 KIF2AO00139 706 aaPredicted RBP6.41□□□□□ -1.38
HDAC8-216ENST00000470998 CCP110O43303 1012 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 STAU1O95793 577 aaKnown RBP6.41□□□□□ -1.38
HDAC8-216ENST00000470998 PTPRAP18433 802 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 RXRAP19793 462 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 ERCC5P28715 1186 aaPredicted RBP6.41□□□□□ -1.38
HDAC8-216ENST00000470998 PRPHP41219 470 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 TFAP4Q01664 338 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 MYL5Q02045 173 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 POU4F2Q12837 409 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 MOGSQ13724 837 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 PKN1Q16512 942 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 SLC9C1Q4G0N8 1177 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 ASPRV1Q53RT3 343 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 MCTP2Q6DN12 878 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 SHC4Q6S5L8 630 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 TREML4Q6UXN2 200 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 KRBA2Q6ZNG9 492 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 CCDC144CPQ8IYA2 1237 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 TEX11Q8IYF3 940 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 TPCN2Q8NHX9 752 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 ZNF333Q96JL9 665 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 ZKSCAN3Q9BRR0 538 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 MYL10Q9BUA6 226 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 GLT8D2Q9H1C3 349 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 EHD4Q9H223 541 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDAC8-216ENST00000470998 DDX4Q9NQI0 724 aaKnown RBP6.41□□□□□ -1.38
HDAC8-216ENST00000470998 DNAAF2Q9NVR5 837 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms