RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 WNT8AQ9H1J5 351 aa17.95■□□□□ 0.46
HDAC6-218ENST00000470942 IL23AQ9NPF7 189 aa17.95■□□□□ 0.46
HDAC6-218ENST00000470942 HAS3O00219 553 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 ATP9AO75110 1047 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 LGALS2P05162 132 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 SSRP1Q08945 709 aaKnown RBP17.94■□□□□ 0.46
HDAC6-218ENST00000470942 TMEM240Q5SV17 173 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 UTP14CQ5TAP6 766 aaKnown RBP17.94■□□□□ 0.46
HDAC6-218ENST00000470942 GPR153Q6NV75 609 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 PSRC1Q6PGN9 363 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-218ENST00000470942 CPLX2Q6PUV4 134 aaKnown RBP17.94■□□□□ 0.46
HDAC6-218ENST00000470942 ZNF365Q70YC5 407 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 SESTD1Q86VW0 696 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 TRIM22Q8IYM9 498 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 RETREG2Q8NC44 543 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 GPR20Q99678 358 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 MXRA8Q9BRK3 442 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 JADE2Q9NQC1 790 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 GTF2IRD1Q9UHL9 959 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 LAMA3Q16787 3333 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 SCN5AQ14524 2016 aa17.94■□□□□ 0.46
HDAC6-218ENST00000470942 ESYT2A0FGR8 921 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 H3BRB1 525 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 GNA11P29992 359 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 ZNF76P36508 570 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 CLK2P49760 499 aaKnown RBP17.93■□□□□ 0.46
HDAC6-218ENST00000470942 BFSP2Q13515 415 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 RPUSD2Q8IZ73 545 aaKnown RBP17.93■□□□□ 0.46
HDAC6-218ENST00000470942 CCDC155Q8N6L0 562 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 CCDC148Q8NFR7 591 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 C16orf70Q9BSU1 422 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 ZMYND12Q9H0C1 365 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 TUT1Q9H6E5 874 aaKnown RBP17.93■□□□□ 0.46
HDAC6-218ENST00000470942 KAT6AQ92794 2004 aa17.93■□□□□ 0.46
HDAC6-218ENST00000470942 MAFGO15525 162 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 SEC24BO95487 1268 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 FGBP02675 491 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 KCNA2P16389 499 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 SREBF1P36956 1147 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 Q7L0L9 218 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 REXO1Q8N1G1 1221 aaKnown RBP17.92■□□□□ 0.46
HDAC6-218ENST00000470942 DEFB123Q8N688 67 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 CYP2W1Q8TAV3 490 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 VPS54Q9P1Q0 977 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 TELO2Q9Y4R8 837 aa17.92■□□□□ 0.46
HDAC6-218ENST00000470942 LAMA2P24043 3122 aaKnown RBP17.92■□□□□ 0.46
HDAC6-218ENST00000470942 PITPNM1O00562 1244 aa17.91■□□□□ 0.46
HDAC6-218ENST00000470942 ADAMTS3O15072 1205 aa17.91■□□□□ 0.46
HDAC6-218ENST00000470942 ARHGAP4P98171 946 aa17.91■□□□□ 0.46
HDAC6-218ENST00000470942 CEP55Q53EZ4 464 aa17.91■□□□□ 0.46
HDAC6-218ENST00000470942 MCTP2Q6DN12 878 aa17.91■□□□□ 0.46
HDAC6-218ENST00000470942 DEFB128Q7Z7B8 93 aa17.91■□□□□ 0.46
HDAC6-218ENST00000470942 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
HDAC6-218ENST00000470942 SLKQ9H2G2 1235 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-218ENST00000470942 KCNH7Q9NS40 1196 aa17.91■□□□□ 0.46
HDAC6-218ENST00000470942 TANC1Q9C0D5 1861 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 C17orf102A2RUQ5 167 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 DEXIO95424 95 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 ARP10275 920 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 TCF7P36402 384 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-218ENST00000470942 AK2P54819 239 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 NLRP5P59047 1200 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 SMAD3P84022 425 aaKnown RBP17.9■□□□□ 0.46
HDAC6-218ENST00000470942 ZNF200P98182 395 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-218ENST00000470942 ANKRD1Q15327 319 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 OTOP2Q7RTS6 562 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 TRIM50Q86XT4 487 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 CAGE1Q8TC20 777 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 SEPT1Q8WYJ6 367 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 CTAGE1Q96RT6 745 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 MTIF3Q9H2K0 278 aaKnown RBP17.9■□□□□ 0.46
HDAC6-218ENST00000470942 SH3GLB2Q9NR46 395 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 ZNF215Q9UL58 517 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-218ENST00000470942 TPCN1Q9ULQ1 816 aa17.9■□□□□ 0.46
HDAC6-218ENST00000470942 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-218ENST00000470942 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-218ENST00000470942 IQCF3P0C7M6 154 aa17.89■□□□□ 0.45
HDAC6-218ENST00000470942 SMIM10L2AP0DMW4 78 aa17.89■□□□□ 0.45
HDAC6-218ENST00000470942 SMIM10L2BP0DMW5 78 aa17.89■□□□□ 0.45
HDAC6-218ENST00000470942 SCRN1Q12765 414 aa17.89■□□□□ 0.45
HDAC6-218ENST00000470942 PTK7Q13308 1070 aa17.89■□□□□ 0.45
HDAC6-218ENST00000470942 RASGRP4Q8TDF6 673 aa17.89■□□□□ 0.45
HDAC6-218ENST00000470942 HERVK_113Q902F9 699 aa17.89■□□□□ 0.45
HDAC6-218ENST00000470942 SDF4Q9BRK5 362 aa17.89■□□□□ 0.45
HDAC6-218ENST00000470942 GSTTP1A0A1W2PQM5 241 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 ZBBXA8MT70 800 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 MEIS1O00470 390 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 PFKFB2O60825 505 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 CDKL5O76039 1030 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 CYP3A4P08684 503 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 RFC2P35250 354 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 HIC1Q14526 733 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 ZNF697Q5TEC3 545 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 PLA2G4DQ86XP0 818 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 AFAP1L1Q8TED9 768 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 DHX38Q92620 1227 aaKnown RBP17.88■□□□□ 0.45
HDAC6-218ENST00000470942 ATP6V0A1Q93050 837 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 FTOQ9C0B1 505 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC6-218ENST00000470942 RNPEPQ9H4A4 650 aa17.88■□□□□ 0.45
HDAC6-218ENST00000470942 AGO4Q9HCK5 861 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms