RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 RBM12BQ8IXT5 1001 aaKnown RBP6.15□□□□□ -1.42
ITGA6-209ENST00000470259 LGI4Q8N135 537 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 OSBP2Q969R2 916 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 LCORQ96JN0 433 aaPredicted RBP6.15□□□□□ -1.42
ITGA6-209ENST00000470259 IPO9Q96P70 1041 aaKnown RBP6.15□□□□□ -1.42
ITGA6-209ENST00000470259 CDC6Q99741 560 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 ASH2LQ9UBL3 628 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 NUB1Q9Y5A7 615 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 ZNF536O15090 1300 aa6.15□□□□□ -1.43
ITGA6-209ENST00000470259 IL13P35225 146 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 GPR85P60893 370 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 NTRK3Q16288 839 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 CYP4F22Q6NT55 531 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 WRNIP1Q96S55 665 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 TMEM209Q96SK2 561 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 SPATA9Q9BWV2 254 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 INVSQ9Y283 1065 aa6.14□□□□□ -1.43
ITGA6-209ENST00000470259 PDPK1O15530 556 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 ADRB1P08588 477 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 ZNF827Q17R98 1081 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 MTERF2Q49AM1 385 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 PRR31Q5SQ13 230 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 SPATC1Q76KD6 591 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 OTOP3Q7RTS5 596 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 ZFYVE21Q9BQ24 234 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 ALG1Q9BT22 464 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 TMEM168Q9H0V1 697 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 RBPJLQ9UBG7 517 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 PFDN2Q9UHV9 154 aa6.13□□□□□ -1.43
ITGA6-209ENST00000470259 FAM47E-STBD1D6RA91 191 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 LTFP02788 710 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 SOD2P04179 222 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 ZNF28P17035 718 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 GTF2F1P35269 517 aaKnown RBP eCLIP6.12□□□□□ -1.43
ITGA6-209ENST00000470259 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
ITGA6-209ENST00000470259 TUSC3Q13454 348 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 VASNQ6EMK4 673 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 STYK1Q6J9G0 422 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 TRMT10BQ6PF06 316 aaKnown RBP6.12□□□□□ -1.43
ITGA6-209ENST00000470259 DBX2Q6ZNG2 339 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.12□□□□□ -1.43
ITGA6-209ENST00000470259 CLEC4DQ8WXI8 215 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 ZNF669Q96BR6 464 aaPredicted RBP6.12□□□□□ -1.43
ITGA6-209ENST00000470259 FTSJ1Q9UET6 329 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 DSEQ9UL01 958 aa6.12□□□□□ -1.43
ITGA6-209ENST00000470259 C9orf118A6NHY6 69 aa6.11□□□□□ -1.43
ITGA6-209ENST00000470259 NKRFO15226 690 aaKnown RBP eCLIP6.11□□□□□ -1.43
ITGA6-209ENST00000470259 MLLT6P55198 1093 aaPredicted RBP6.11□□□□□ -1.43
ITGA6-209ENST00000470259 EFEMP1Q12805 493 aa6.11□□□□□ -1.43
ITGA6-209ENST00000470259 MTDHQ86UE4 582 aaKnown RBP6.11□□□□□ -1.43
ITGA6-209ENST00000470259 LOXL4Q96JB6 756 aa6.11□□□□□ -1.43
ITGA6-209ENST00000470259 GPR20Q99678 358 aa6.11□□□□□ -1.43
ITGA6-209ENST00000470259 IPPKQ9H8X2 491 aa6.11□□□□□ -1.43
ITGA6-209ENST00000470259 CNOT11Q9UKZ1 510 aaKnown RBP6.11□□□□□ -1.43
ITGA6-209ENST00000470259 ZDHHC9Q9Y397 364 aa6.11□□□□□ -1.43
ITGA6-209ENST00000470259 TRAF6Q9Y4K3 522 aa6.11□□□□□ -1.43
ITGA6-209ENST00000470259 ASXL2Q76L83 1435 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 FBXO21O94952 628 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 PLATP00750 562 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 ITGB3P05106 788 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 RASGRF1Q13972 1273 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 TBC1D10BQ4KMP7 808 aaPredicted RBP6.1□□□□□ -1.43
ITGA6-209ENST00000470259 PAN2Q504Q3 1202 aaKnown RBP6.1□□□□□ -1.43
ITGA6-209ENST00000470259 PHF19Q5T6S3 580 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 GLB1LQ6UWU2 654 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 HHIPL2Q6UWX4 724 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 SCUBE1Q8IWY4 988 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 TTLL11Q8NHH1 800 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 UHMK1Q8TAS1 419 aaKnown RBP6.1□□□□□ -1.43
ITGA6-209ENST00000470259 BORCS6Q96GS4 357 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
ITGA6-209ENST00000470259 TRBV23-1A0A0A0MS06 115 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 FAHP16930 419 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 GLRBP48167 497 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 EP400NLQ6ZTU2 488 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.09□□□□□ -1.43
ITGA6-209ENST00000470259 PLEKHH3Q7Z736 793 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 ZCCHC14Q8WYQ9 949 aaKnown RBP6.09□□□□□ -1.43
ITGA6-209ENST00000470259 YTHDC1Q96MU7 727 aaKnown RBP6.09□□□□□ -1.43
ITGA6-209ENST00000470259 HIRIP3Q9BW71 556 aaPredicted RBP6.09□□□□□ -1.43
ITGA6-209ENST00000470259 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 JADE2Q9NQC1 790 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 DLL4Q9NR61 685 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 SMPD4Q9NXE4 827 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 SIRPGQ9P1W8 387 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 WASF3Q9UPY6 502 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 MSRB2Q9Y3D2 182 aa6.09□□□□□ -1.43
ITGA6-209ENST00000470259 AQP7O14520 342 aa6.08□□□□□ -1.44
ITGA6-209ENST00000470259 B4GALT3O60512 393 aa6.08□□□□□ -1.44
ITGA6-209ENST00000470259 CKMP06732 381 aa6.08□□□□□ -1.44
ITGA6-209ENST00000470259 SUMO1P63165 101 aaKnown RBP6.08□□□□□ -1.44
ITGA6-209ENST00000470259 NFKB2Q00653 900 aa6.08□□□□□ -1.44
ITGA6-209ENST00000470259 PAK1Q13153 545 aa6.08□□□□□ -1.44
ITGA6-209ENST00000470259 SURF1Q15526 300 aa6.08□□□□□ -1.44
ITGA6-209ENST00000470259 FAM209AQ5JX71 171 aa6.08□□□□□ -1.44
ITGA6-209ENST00000470259 NBPF6Q5VWK0 638 aa6.08□□□□□ -1.44
ITGA6-209ENST00000470259 ZBTB38Q8NAP3 1195 aaPredicted RBP6.08□□□□□ -1.44
ITGA6-209ENST00000470259 CHST13Q8NET6 341 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms