RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 SGPL1O95470 568 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 GJA8P48165 433 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 ORC2Q13416 577 aaPredicted RBP11.96□□□□□ -0.49
SMC1A-206ENST00000470241 LAMC2Q13753 1193 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 METTL7BQ6UX53 244 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 CYFIP1Q7L576 1253 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 DHX37Q8IY37 1157 aaKnown RBP11.96□□□□□ -0.49
SMC1A-206ENST00000470241 TNS4Q8IZW8 715 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 C4orf32Q8N8J7 132 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 KLHDC9Q8NEP7 349 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 HAS1Q92839 578 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.49
SMC1A-206ENST00000470241 MTMR9Q96QG7 549 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 AP5M1Q9H0R1 490 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 TMEM60Q9H2L4 133 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.96□□□□□ -0.49
SMC1A-206ENST00000470241 TBX3O15119 743 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 NEMFO60524 1076 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 PSMD10O75832 226 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 CCNE2O96020 404 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 LRRC41Q15345 812 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 HSDL1Q3SXM5 330 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 GIMAP8Q8ND71 665 aaPredicted RBP11.95□□□□□ -0.5
SMC1A-206ENST00000470241 AFG1LQ8WV93 481 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 FAM20AQ96MK3 541 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 RIT2Q99578 217 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 SDF4Q9BRK5 362 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 MLXIPQ9HAP2 919 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 TBC1D22BQ9NU19 505 aa11.95□□□□□ -0.5
SMC1A-206ENST00000470241 MYH7BA7E2Y1 1941 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 A6NJR5 290 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 DDX39AO00148 427 aaKnown RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 C6orf222P0C671 652 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 CST5P28325 142 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 NUCB2P80303 420 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 BEX3Q00994 111 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 CALCRLQ16602 461 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 FSCN1Q16658 493 aaKnown RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 LRCH2Q5VUJ6 765 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 CCSAPQ6IQ19 270 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 B3GNT9Q6UX72 402 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 PPTC7Q8NI37 304 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 SPATA33Q96N06 139 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 GPR20Q99678 358 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 SPC25Q9HBM1 224 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 VAV3Q9UKW4 847 aa11.94□□□□□ -0.5
SMC1A-206ENST00000470241 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-206ENST00000470241 GSTTP1A0A1W2PQM5 241 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 GAS7O60861 476 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 TFRCP02786 760 aaKnown RBP11.93□□□□□ -0.5
SMC1A-206ENST00000470241 MMP3P08254 477 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 OR52Z1P0C646 297 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 SP4Q02446 784 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 PTGDRQ13258 359 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 SF3A1Q15459 793 aaKnown RBP11.93□□□□□ -0.5
SMC1A-206ENST00000470241 GNASQ5JWF2 1037 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 RNF180Q86T96 592 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 SLFN12Q8IYM2 578 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 ARRDC4Q8NCT1 418 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 USP28Q96RU2 1077 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 TEKT3Q9BXF9 490 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 UNC45AQ9H3U1 944 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 CLIC4Q9Y696 253 aa11.93□□□□□ -0.5
SMC1A-206ENST00000470241 KIAA1217Q5T5P2 1943 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 DNM1LO00429 736 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 NOP56O00567 594 aaKnown RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 MARCH6O60337 910 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 ATG7O95352 703 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 BAG4O95429 457 aaKnown RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 EN2P19622 333 aaPredicted RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 TXKP42681 527 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 CPT1AP50416 773 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 ACTR2P61160 394 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 ATP2C1P98194 919 aaPredicted RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 KRT76Q01546 638 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 SPIRE1Q08AE8 756 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 PTPAQ15257 358 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 KCNA10Q16322 511 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 IL17AQ16552 155 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 FOXD4L6Q3SYB3 417 aaPredicted RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 ZNF746Q6NUN9 644 aaPredicted RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 FOXD4L3Q6VB84 417 aaPredicted RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 SEPT1Q8WYJ6 367 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 CHAMP1Q96JM3 812 aa11.92□□□□□ -0.5
SMC1A-206ENST00000470241 TSEN34Q9BSV6 310 aaKnown RBP11.92□□□□□ -0.5
SMC1A-206ENST00000470241 ELP1O95163 1332 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 CCDC85CA6NKD9 419 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 EML1O00423 815 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 LAD1O00515 517 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 CHMP2AO43633 222 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 PPFIA4O75335 1185 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 BMP15O95972 392 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 ASGR1P07306 291 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms