RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 HDAC6Q9UBN7 1215 aa16.13■□□□□ 0.17
COMMD3-208ENST00000470045 NAP1L2Q9ULW6 460 aaPredicted RBP16.13■□□□□ 0.17
COMMD3-208ENST00000470045 TMEM265A0A087WTH1 108 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.12■□□□□ 0.17
COMMD3-208ENST00000470045 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.12■□□□□ 0.17
COMMD3-208ENST00000470045 ESYT2A0FGR8 921 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 LGALS2P05162 132 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 PFKMP08237 780 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 SCG2P13521 617 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 KCNA2P16389 499 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 PDIA3P30101 505 aaKnown RBP16.12■□□□□ 0.17
COMMD3-208ENST00000470045 HOXC8P31273 242 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 ADCY7P51828 1080 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 PKN1Q16512 942 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 CYFIP1Q7L576 1253 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 CAGE1Q8TC20 777 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 DHX38Q92620 1227 aaKnown RBP16.12■□□□□ 0.17
COMMD3-208ENST00000470045 CDHR1Q96JP9 859 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 GPR20Q99678 358 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 GLT8D2Q9H1C3 349 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 EHMT1Q9H9B1 1298 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 PLSCR2Q9NRY7 297 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 TET1Q8NFU7 2136 aa16.12■□□□□ 0.17
COMMD3-208ENST00000470045 PRPF3O43395 683 aaKnown RBP16.11■□□□□ 0.17
COMMD3-208ENST00000470045 FOSP01100 380 aaPredicted RBP16.11■□□□□ 0.17
COMMD3-208ENST00000470045 FGBP02675 491 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 IQCF3P0C7M6 154 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 RFC2P35250 354 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 CHMP4BP1P59074 171 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 AP3B2Q13367 1082 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 BFSP2Q13515 415 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 ZNF697Q5TEC3 545 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 RPUSD2Q8IZ73 545 aaKnown RBP16.11■□□□□ 0.17
COMMD3-208ENST00000470045 C7orf31Q8N865 590 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 GIMAP8Q8ND71 665 aaPredicted RBP16.11■□□□□ 0.17
COMMD3-208ENST00000470045 ALG1Q9BT22 464 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 RNF26Q9BY78 433 aaPredicted RBP16.11■□□□□ 0.17
COMMD3-208ENST00000470045 ANO3Q9BYT9 981 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 NOD1Q9Y239 953 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
COMMD3-208ENST00000470045 SMCO2A6NFE2 343 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 H3BRB1 525 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 NOP56O00567 594 aaKnown RBP16.1■□□□□ 0.17
COMMD3-208ENST00000470045 MAFGO15525 162 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 ATP9AO75110 1047 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 IFNAR1P17181 557 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 SREBF1P36956 1147 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 MTMR1Q13613 665 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 HIC1Q14526 733 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 CCDC155Q8N6L0 562 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 AFAP1L1Q8TED9 768 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 GUCD1Q96NT3 240 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 ZMYND12Q9H0C1 365 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 MTIF3Q9H2K0 278 aaKnown RBP16.1■□□□□ 0.17
COMMD3-208ENST00000470045 TTYH1Q9H313 450 aaPredicted RBP16.1■□□□□ 0.17
COMMD3-208ENST00000470045 TUT1Q9H6E5 874 aaKnown RBP16.1■□□□□ 0.17
COMMD3-208ENST00000470045 JADE2Q9NQC1 790 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 CXXC1Q9P0U4 656 aaPredicted RBP16.1■□□□□ 0.17
COMMD3-208ENST00000470045 TELO2Q9Y4R8 837 aa16.1■□□□□ 0.17
COMMD3-208ENST00000470045 PTPRSQ13332 1948 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 DNAJB2P25686 324 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 PTK7Q13308 1070 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 TRIM71Q2Q1W2 868 aaKnown RBP16.09■□□□□ 0.17
COMMD3-208ENST00000470045 RETREG2Q8NC44 543 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
COMMD3-208ENST00000470045 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 PHKBQ93100 1093 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 PGBD1Q96JS3 809 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 MXRA8Q9BRK3 442 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 UPF3BQ9BZI7 483 aaKnown RBP16.09■□□□□ 0.17
COMMD3-208ENST00000470045 NCOA5Q9HCD5 579 aaKnown RBP16.09■□□□□ 0.17
COMMD3-208ENST00000470045 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 STXBP5LQ9Y2K9 1186 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 COL6A3P12111 3177 aa16.09■□□□□ 0.17
COMMD3-208ENST00000470045 GPNMBQ14956 572 aa16.08■□□□□ 0.16
COMMD3-208ENST00000470045 TRAF7Q6Q0C0 670 aa16.08■□□□□ 0.16
COMMD3-208ENST00000470045 OTOP2Q7RTS6 562 aa16.08■□□□□ 0.16
COMMD3-208ENST00000470045 SERINC5Q86VE9 423 aa16.08■□□□□ 0.16
COMMD3-208ENST00000470045 TRIM50Q86XT4 487 aa16.08■□□□□ 0.16
COMMD3-208ENST00000470045 CCDC12Q8WUD4 166 aaPredicted RBP16.08■□□□□ 0.16
COMMD3-208ENST00000470045 WNT8BQ93098 351 aa16.08■□□□□ 0.16
COMMD3-208ENST00000470045 IL17RAQ96F46 866 aa16.08■□□□□ 0.16
COMMD3-208ENST00000470045 ZNF274Q96GC6 653 aaPredicted RBP16.08■□□□□ 0.16
COMMD3-208ENST00000470045 KAT6AQ92794 2004 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 CHD9Q3L8U1 2897 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 ADAMTS3O15072 1205 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 PARNO95453 639 aaKnown RBP16.07■□□□□ 0.16
COMMD3-208ENST00000470045 SMIM10L2AP0DMW4 78 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 SMIM10L2BP0DMW5 78 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 CKBP12277 381 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 SELPP16109 830 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 TCF7P36402 384 aaPredicted RBP16.07■□□□□ 0.16
COMMD3-208ENST00000470045 ANAPC15P60006 121 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 CCT2P78371 535 aaKnown RBP16.07■□□□□ 0.16
COMMD3-208ENST00000470045 ZNF200P98182 395 aaPredicted RBP16.07■□□□□ 0.16
COMMD3-208ENST00000470045 CEP55Q53EZ4 464 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 MCTP2Q6DN12 878 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 LRRC8DQ7L1W4 858 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 NIPA1Q7RTP0 329 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 DEFB128Q7Z7B8 93 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms