RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SSBP05455 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMC1A-205ENST00000469129 PLA2G4BP0C869 781 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 IDEP14735 1019 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 HSPA6P17066 643 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 CCND2P30279 289 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 STAT3P40763 770 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 LRRC63Q05C16 580 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 PPATQ06203 517 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 FSTL1Q12841 308 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 DGKZQ13574 1117 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 PRKG1Q13976 671 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 CCDC144BQ3MJ40 725 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 NSMFQ6X4W1 530 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.41□□□□□ -0.74
SMC1A-205ENST00000469129 ARMC9Q7Z3E5 817 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 GPBP1Q86WP2 473 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 ERO1BQ86YB8 467 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 LRRC8AQ8IWT6 810 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 GUF1Q8N442 669 aaKnown RBP10.41□□□□□ -0.74
SMC1A-205ENST00000469129 SMC1BQ8NDV3 1235 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 REPS2Q8NFH8 660 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 SYTL5Q8TDW5 730 aaPredicted RBP10.41□□□□□ -0.74
SMC1A-205ENST00000469129 TBC1D5Q92609 795 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 DDX12PQ92771 950 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 TSG101Q99816 390 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 NUDT12Q9BQG2 462 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 TAF1DQ9H5J8 278 aaPredicted RBP10.41□□□□□ -0.74
SMC1A-205ENST00000469129 SAMSN1Q9NSI8 373 aaKnown RBP10.41□□□□□ -0.74
SMC1A-205ENST00000469129 FBXO40Q9UH90 709 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 LIMA1Q9UHB6 759 aaKnown RBP10.41□□□□□ -0.74
SMC1A-205ENST00000469129 PFASO15067 1338 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 ITIH6Q6UXX5 1313 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 POTEFA5A3E0 1075 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 SPDYE5A6NIY4 337 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 UNCXA6NJT0 531 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 SPDYE16A6NNV3 312 aaPredicted RBP10.4□□□□□ -0.74
SMC1A-205ENST00000469129 KCNJ18B7U540 433 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 E9PMD0 336 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 IPO5O00410 1097 aaKnown RBP10.4□□□□□ -0.74
SMC1A-205ENST00000469129 CXCL11O14625 94 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 STAM2O75886 525 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 EYA4O95677 639 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 TPM1P09493 284 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 POTEIP0CG38 1075 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 COPB2P35606 906 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 RPS6P62753 249 aaKnown RBP10.4□□□□□ -0.74
SMC1A-205ENST00000469129 UBXN2AP68543 259 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 EHHADHQ08426 723 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 COASYQ13057 564 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 PABPC4Q13310 644 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMC1A-205ENST00000469129 PPIL2Q13356 520 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 TRIM14Q14142 442 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
SMC1A-205ENST00000469129 KCNJ12Q14500 433 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 PGM5Q15124 567 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 EPHA7Q15375 998 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 MUM1L1Q5H9M0 696 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 FAM26FQ5R3K3 315 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 ARHGEF16Q5VV41 709 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 SPECC1LQ69YQ0 1117 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 POTEGQ6S5H5 508 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 POTEEQ6S8J3 1075 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 SLC30A10Q6XR72 485 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 DYMQ7RTS9 669 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 KCNK18Q7Z418 384 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 NLRX1Q86UT6 975 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 CATSPER3Q86XQ3 398 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 CHST13Q8NET6 341 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 KIAA1524Q8TCG1 905 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 GJA10Q969M2 543 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 MED15Q96RN5 788 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 EIF2AK1Q9BQI3 630 aaKnown RBP10.4□□□□□ -0.74
SMC1A-205ENST00000469129 PXMP2Q9NR77 195 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 TBC1D22BQ9NU19 505 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 PANK4Q9NVE7 773 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 KCND2Q9NZV8 630 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 NRBP1Q9UHY1 535 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 ZNF214Q9UL59 606 aaPredicted RBP10.4□□□□□ -0.74
SMC1A-205ENST00000469129 UBIAD1Q9Y5Z9 338 aa10.4□□□□□ -0.74
SMC1A-205ENST00000469129 ZNFX1Q9P2E3 1918 aaKnown RBP10.4□□□□□ -0.74
SMC1A-205ENST00000469129 A0A0G2JLL6 359 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 CCP110O43303 1012 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 TBCAO75347 108 aaKnown RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 POTEJP0CG39 1038 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 SPATA31C1P0DKV0 1188 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 GAP43P17677 238 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 CYP11B2P19099 503 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 KCNJ6P48051 423 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 JAK3P52333 1124 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 COPB1P53618 953 aaKnown RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 SLC12A3P55017 1021 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 IRX3P78415 501 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 MTMR1Q13613 665 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 KRT31Q15323 416 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 ECM1Q16610 540 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 EAPPQ56P03 285 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-205ENST00000469129 HSP90AA4PQ58FG1 418 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 TCP11X2Q5H9J9 407 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 TTI2Q6NXR4 508 aa10.39□□□□□ -0.75
SMC1A-205ENST00000469129 OTOP1Q7RTM1 612 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms