RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TMCO1Q9UM00 188 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 C15orf41Q9Y2V0 281 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 DAAM1Q9Y4D1 1078 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 CTDP1Q9Y5B0 961 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 SNX14Q9Y5W7 946 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 SALL3Q9BXA9 1300 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 ATP10DQ9P241 1426 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 ATP7BP35670 1465 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 KIAA0556O60303 1618 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 H3BQV1 296 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 ZSCAN9O15535 394 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 MMP20O60882 483 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 MAP3K6O95382 1288 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 ZFXP17010 805 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 DESP17661 470 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 NOS3P29474 1203 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 PIP4K2AP48426 406 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 EPHB4P54760 987 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 TBX2Q13207 712 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF211Q13398 564 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 RASA3Q14644 834 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 COL19A1Q14993 1142 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 CFAP100Q494V2 611 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 EAPPQ56P03 285 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC178Q5BJE1 867 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 SPECC1Q5M775 1068 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 SEPT14Q6ZU15 432 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 C11orf57Q6ZUT1 292 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC80Q76M96 950 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 BZW1Q7L1Q6 419 aaKnown RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 LCA5Q86VQ0 697 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 NT5DC4Q86YG4 428 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 TMTC1Q8IUR5 882 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 CNGA4Q8IV77 575 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 ANKS4BQ8N8V4 417 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 ENGASEQ8NFI3 743 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 B4GALNT2Q8NHY0 566 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 TRPM4Q8TD43 1214 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 WFDC12Q8WWY7 111 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 GFM2Q969S9 779 aaKnown RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 PLD4Q96BZ4 506 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 DHX58Q96C10 678 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 ACSBG1Q96GR2 724 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 FAM192AQ9GZU8 254 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 MIS12Q9H081 205 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 BHMT2Q9H2M3 363 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 NRDE2Q9H7Z3 1164 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 CD248Q9HCU0 757 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 TRPV5Q9NQA5 729 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 UTP6Q9NYH9 597 aaKnown RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 MAGEC2Q9UBF1 373 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 EGFL7Q9UHF1 273 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 PCDHGC5Q9Y5F6 944 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 SLC4A7Q9Y6M7 1214 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 MAP3K15Q6ZN16 1313 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 PNPLA6Q8IY17 1366 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 TDRD9Q8NDG6 1382 aaKnown RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 CARMIL2Q6F5E8 1435 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 CD109Q6YHK3 1445 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 MAGI1Q96QZ7 1491 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-207ENST00000468925 GLI2P10070 1586 aa5.38□□□□□ -1.55
SF3B1-207ENST00000468925 ANO9A1A5B4 782 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 A6NHS1 94 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 LRRIQ3A6PVS8 624 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 AKR1B15C9JRZ8 316 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 BIN1O00499 593 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 PRPF3O43395 683 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 DEAF1O75398 565 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 YEATS4O95619 227 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 GNAI2P04899 355 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 PSAPP07602 524 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 SLC3A2P08195 630 aaKnown RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC166P0CW27 439 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 IBSPP21815 317 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 PSMC4P43686 418 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 SESN3P58005 492 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 VSNL1P62760 191 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 BIRC3Q13489 604 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 KCNB1Q14721 858 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 NFE2L2Q16236 605 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 PCSK7Q16549 785 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 TWISTNBQ3B726 338 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 USH1GQ495M9 461 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 FAM26DQ5JW98 314 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 RNF187Q5TA31 235 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 C6orf89Q6UWU4 347 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 CCNI2Q6ZMN8 369 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-207ENST00000468925 RASGRP2Q7LDG7 609 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 CROCCP2Q86T23 111 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 JAZF1Q86VZ6 243 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 PPFIBP1Q86W92 1011 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 FBXO11Q86XK2 927 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 ETFBKMTQ8IXQ9 262 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 AFAP1Q8N556 730 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 TRIML1Q8N9V2 468 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 LRRN4CLQ8ND94 238 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 ATL2Q8NHH9 583 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 RASSF8Q8NHQ8 419 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 WDR66Q8TBY9 1149 aa5.37□□□□□ -1.55
SF3B1-207ENST00000468925 CAVIN3Q969G5 261 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms