RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PPP2R2DQ66LE6 453 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 KCNV1Q6PIU1 500 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 INPP4AQ96PE3 977 aaPredicted RBP12.83□□□□□ -0.36
COL4A6-205ENST00000468338 PSTPIP2Q9H939 334 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.36
COL4A6-205ENST00000468338 DCDC2CA8MYV0 355 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 hCG_1984214I3L0E3 225 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
COL4A6-205ENST00000468338 GH1P01241 217 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 MYCLP12524 364 aaPredicted RBP12.82□□□□□ -0.36
COL4A6-205ENST00000468338 HOXD8P13378 290 aaPredicted RBP12.82□□□□□ -0.36
COL4A6-205ENST00000468338 PDIA3P30101 505 aaKnown RBP12.82□□□□□ -0.36
COL4A6-205ENST00000468338 CCND2P30279 289 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 ICAM3P32942 547 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL4A6-205ENST00000468338 ANAPC15P60006 121 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 ITGA7Q13683 1181 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 WWC2Q6AWC2 1192 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 XRRA1Q6P2D8 792 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 ZNF713Q8N859 430 aaPredicted RBP12.82□□□□□ -0.36
COL4A6-205ENST00000468338 SPIRE2Q8WWL2 714 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 CUL5Q93034 780 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 CYP46A1Q9Y6A2 500 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 MRVI1Q9Y6F6 885 aa12.82□□□□□ -0.36
COL4A6-205ENST00000468338 CD46P15529 392 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 LAMC2Q13753 1193 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 PFKFB3Q16875 520 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-205ENST00000468338 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 BRDTQ58F21 947 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-205ENST00000468338 PCNX4Q63HM2 1172 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 AFG1LQ8WV93 481 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 GPKOWQ92917 476 aaPredicted RBP eCLIP12.81□□□□□ -0.36
COL4A6-205ENST00000468338 VTI1AQ96AJ9 217 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 LBHD1Q9BQE6 289 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-205ENST00000468338 MTG1Q9BT17 334 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-205ENST00000468338 RIC8AQ9NPQ8 531 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 LIMD1Q9UGP4 676 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 LAMA3Q16787 3333 aa12.81□□□□□ -0.36
COL4A6-205ENST00000468338 SPATA31C2B4DYI2 1134 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 STXBP3O00186 592 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 PRPF3O43395 683 aaKnown RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 EIF5BO60841 1220 aaKnown RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 MMP3P08254 477 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 IFNAR1P17181 557 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 PSMC6P62333 389 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 SP2Q02086 613 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 PKN1Q16512 942 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 CELF3Q5SZQ8 465 aaKnown RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 TDHQ8IZJ6 230 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 PPTC7Q8NI37 304 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 BADQ92934 168 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 ZNF274Q96GC6 653 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 UPF3BQ9BZI7 483 aaKnown RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 UBE2OQ9C0C9 1292 aaKnown RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 ALDH8A1Q9H2A2 487 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 PRDM5Q9NQX1 630 aaPredicted RBP12.8□□□□□ -0.36
COL4A6-205ENST00000468338 TMEM39AQ9NV64 488 aa12.8□□□□□ -0.36
COL4A6-205ENST00000468338 ESYT2A0FGR8 921 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 TIMP1P01033 207 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 SCG2P13521 617 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
COL4A6-205ENST00000468338 DNAJB2P25686 324 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 LRIT3Q3SXY7 679 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 GNPTABQ3T906 1256 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 NFRKBQ6P4R8 1299 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 KAT2BQ92831 832 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 SENP7Q9BQF6 1050 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-205ENST00000468338 GLT8D2Q9H1C3 349 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 PRM3Q9NNZ6 103 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 PCDHA6Q9UN73 950 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 LHX6Q9UPM6 363 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 PCDHA8Q9Y5H6 950 aa12.79□□□□□ -0.36
COL4A6-205ENST00000468338 SMCO2A6NFE2 343 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 DDX11L8A8MPP1 907 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 HAS3O00219 553 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 SPTLC1O15269 473 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 TLR3O15455 904 aaKnown RBP12.78□□□□□ -0.36
COL4A6-205ENST00000468338 FIBPO43427 364 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 B4GALT4O60513 344 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 PPFIA4O75335 1185 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 FOSP01100 380 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-205ENST00000468338 MYL3P08590 195 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 RAG1P15918 1043 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 NAPAP54920 295 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 PTPN11Q06124 597 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-205ENST00000468338 DGKDQ16760 1214 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 UBE2SQ16763 222 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 NBPF20Q3BBV1 942 aa12.78□□□□□ -0.36
COL4A6-205ENST00000468338 HSDL1Q3SXM5 330 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms