RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TM6SF1Q9BZW5 370 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 GLT8D2Q9H1C3 349 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 EHMT1Q9H9B1 1298 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 TET1Q8NFU7 2136 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 SMCO2A6NFE2 343 aa19.59■□□□□ 0.73
SSBP1-207ENST00000468267 NOP56O00567 594 aaKnown RBP19.59■□□□□ 0.73
SSBP1-207ENST00000468267 FOSP01100 380 aaPredicted RBP19.59■□□□□ 0.73
SSBP1-207ENST00000468267 ITGB5P18084 799 aa19.59■□□□□ 0.73
SSBP1-207ENST00000468267 RETREG2Q8NC44 543 aa19.59■□□□□ 0.73
SSBP1-207ENST00000468267 GIMAP8Q8ND71 665 aaPredicted RBP19.59■□□□□ 0.73
SSBP1-207ENST00000468267 CDHR1Q96JP9 859 aa19.59■□□□□ 0.73
SSBP1-207ENST00000468267 GPR20Q99678 358 aa19.59■□□□□ 0.73
SSBP1-207ENST00000468267 UBIAD1Q9Y5Z9 338 aa19.59■□□□□ 0.73
SSBP1-207ENST00000468267 KAT6AQ92794 2004 aa19.59■□□□□ 0.73
SSBP1-207ENST00000468267 PRPF3O43395 683 aaKnown RBP19.58■□□□□ 0.72
SSBP1-207ENST00000468267 LGALS2P05162 132 aa19.58■□□□□ 0.72
SSBP1-207ENST00000468267 SCG2P13521 617 aa19.58■□□□□ 0.72
SSBP1-207ENST00000468267 PDIA3P30101 505 aaKnown RBP19.58■□□□□ 0.72
SSBP1-207ENST00000468267 TOB2Q14106 344 aaPredicted RBP19.58■□□□□ 0.72
SSBP1-207ENST00000468267 NTRK3Q16288 839 aa19.58■□□□□ 0.72
SSBP1-207ENST00000468267 ZNF697Q5TEC3 545 aa19.58■□□□□ 0.72
SSBP1-207ENST00000468267 TANC1Q9C0D5 1861 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 H3BRB1 525 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 ATP9AO75110 1047 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 PFKMP08237 780 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 IQCF3P0C7M6 154 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 KCNA2P16389 499 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 RFC2P35250 354 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 PKN1Q16512 942 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 OTOP2Q7RTS6 562 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 CCDC155Q8N6L0 562 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 CAGE1Q8TC20 777 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 MTIF3Q9H2K0 278 aaKnown RBP19.57■□□□□ 0.72
SSBP1-207ENST00000468267 SEMA6BQ9H3T3 888 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 TUT1Q9H6E5 874 aaKnown RBP19.57■□□□□ 0.72
SSBP1-207ENST00000468267 JADE2Q9NQC1 790 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 CXXC1Q9P0U4 656 aaPredicted RBP19.57■□□□□ 0.72
SSBP1-207ENST00000468267 TELO2Q9Y4R8 837 aa19.57■□□□□ 0.72
SSBP1-207ENST00000468267 MAFGO15525 162 aa19.56■□□□□ 0.72
SSBP1-207ENST00000468267 CLK2P49760 499 aaKnown RBP19.56■□□□□ 0.72
SSBP1-207ENST00000468267 MTMR1Q13613 665 aa19.56■□□□□ 0.72
SSBP1-207ENST00000468267 AFAP1L1Q8TED9 768 aa19.56■□□□□ 0.72
SSBP1-207ENST00000468267 DHX38Q92620 1227 aaKnown RBP19.56■□□□□ 0.72
SSBP1-207ENST00000468267 PHKBQ93100 1093 aa19.56■□□□□ 0.72
SSBP1-207ENST00000468267 PGBD1Q96JS3 809 aa19.56■□□□□ 0.72
SSBP1-207ENST00000468267 FAM161BQ96MY7 647 aa19.56■□□□□ 0.72
SSBP1-207ENST00000468267 UPF3BQ9BZI7 483 aaKnown RBP19.56■□□□□ 0.72
SSBP1-207ENST00000468267 CHD7Q9P2D1 2997 aa19.56■□□□□ 0.72
SSBP1-207ENST00000468267 EYSQ5T1H1 3165 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 ESYT2A0FGR8 921 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 IFNAR1P17181 557 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 CCT2P78371 535 aaKnown RBP19.55■□□□□ 0.72
SSBP1-207ENST00000468267 ZNF200P98182 395 aaPredicted RBP19.55■□□□□ 0.72
SSBP1-207ENST00000468267 AKAP17AQ02040 695 aaKnown RBP19.55■□□□□ 0.72
SSBP1-207ENST00000468267 RBL2Q08999 1139 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 PTK7Q13308 1070 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 AP3B2Q13367 1082 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 HIC1Q14526 733 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 DEFB128Q7Z7B8 93 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 ZNF274Q96GC6 653 aaPredicted RBP19.55■□□□□ 0.72
SSBP1-207ENST00000468267 GUCD1Q96NT3 240 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 MXRA8Q9BRK3 442 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 ANO3Q9BYT9 981 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 ZMYND12Q9H0C1 365 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 TTYH1Q9H313 450 aaPredicted RBP19.55■□□□□ 0.72
SSBP1-207ENST00000468267 NCOA5Q9HCD5 579 aaKnown RBP19.55■□□□□ 0.72
SSBP1-207ENST00000468267 TMEM260Q9NX78 707 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 STXBP5LQ9Y2K9 1186 aa19.55■□□□□ 0.72
SSBP1-207ENST00000468267 TMEM265A0A087WTH1 108 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 GRXCR1A8MXD5 290 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 SELPP16109 830 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 HOXC8P31273 242 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 SREBF1P36956 1147 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 SP4Q02446 784 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 CYP2W1Q8TAV3 490 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 CCDC12Q8WUD4 166 aaPredicted RBP19.54■□□□□ 0.72
SSBP1-207ENST00000468267 RNF26Q9BY78 433 aaPredicted RBP19.54■□□□□ 0.72
SSBP1-207ENST00000468267 KCNH7Q9NS40 1196 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 PRUNE2Q8WUY3 3088 aa19.54■□□□□ 0.72
SSBP1-207ENST00000468267 SMIM10L2AP0DMW4 78 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 SMIM10L2BP0DMW5 78 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 CKBP12277 381 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 DNAJB2P25686 324 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 TRIM71Q2Q1W2 868 aaKnown RBP19.53■□□□□ 0.72
SSBP1-207ENST00000468267 CEP55Q53EZ4 464 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 UTP14CQ5TAP6 766 aaKnown RBP19.53■□□□□ 0.72
SSBP1-207ENST00000468267 SLC26A6Q9BXS9 759 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 C6orf50Q9HD87 102 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 PKD2L1Q9P0L9 805 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 SLC4A7Q9Y6M7 1214 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 GBF1Q92538 1859 aa19.53■□□□□ 0.72
SSBP1-207ENST00000468267 GSTTP1A0A1W2PQM5 241 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 C17orf102A2RUQ5 167 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 PPFIA3O75145 1194 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 TCF7P36402 384 aaPredicted RBP19.52■□□□□ 0.72
SSBP1-207ENST00000468267 JAKMIP3Q5VZ66 844 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 MCTP2Q6DN12 878 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 LRRC8DQ7L1W4 858 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms