RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.29
CDHR3-205ENST00000468143 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 MXRA8Q9BRK3 442 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 KATNAL1Q9BW62 490 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 NID2Q14112 1375 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 KIAA1217Q5T5P2 1943 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 GRXCR1A8MXD5 290 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 H3BRB1 525 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 FOSP01100 380 aaPredicted RBP13.2□□□□□ -0.3
CDHR3-205ENST00000468143 LGALS2P05162 132 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 ARP10275 920 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 KCNA2P16389 499 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
CDHR3-205ENST00000468143 FAM109BQ6ICB4 259 aaPredicted RBP13.2□□□□□ -0.3
CDHR3-205ENST00000468143 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 TRIM50Q86XT4 487 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 UIMC1Q96RL1 719 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 SENP7Q9BQF6 1050 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
CDHR3-205ENST00000468143 TUT1Q9H6E5 874 aaKnown RBP13.2□□□□□ -0.3
CDHR3-205ENST00000468143 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 GTF2IRD1Q9UHL9 959 aa13.2□□□□□ -0.3
CDHR3-205ENST00000468143 CPLX1O14810 134 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 IQCF3P0C7M6 154 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 ZNF76P36508 570 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 AP3B2Q13367 1082 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
CDHR3-205ENST00000468143 GIMAP8Q8ND71 665 aaPredicted RBP13.19□□□□□ -0.3
CDHR3-205ENST00000468143 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
CDHR3-205ENST00000468143 VWCEQ96DN2 955 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 CDHR1Q96JP9 859 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 ZMYND12Q9H0C1 365 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
CDHR3-205ENST00000468143 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
CDHR3-205ENST00000468143 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.18□□□□□ -0.3
CDHR3-205ENST00000468143 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.18□□□□□ -0.3
CDHR3-205ENST00000468143 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 ESYT2A0FGR8 921 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 TCF7P36402 384 aaPredicted RBP13.18□□□□□ -0.3
CDHR3-205ENST00000468143 SREBF1P36956 1147 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 AK2P54819 239 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 NLRP5P59047 1200 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 ANAPC15P60006 121 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 ARHGAP4P98171 946 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 SCRN1Q12765 414 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 BFSP2Q13515 415 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 GPR153Q6NV75 609 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 PSRC1Q6PGN9 363 aaPredicted RBP13.18□□□□□ -0.3
CDHR3-205ENST00000468143 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
CDHR3-205ENST00000468143 WNT8BQ93098 351 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDHR3-205ENST00000468143 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
CDHR3-205ENST00000468143 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
CDHR3-205ENST00000468143 C17orf102A2RUQ5 167 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 ZBBXA8MT70 800 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 DDX39AO00148 427 aaKnown RBP13.17□□□□□ -0.3
CDHR3-205ENST00000468143 MAFGO15525 162 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 GNA11P29992 359 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 SMAD3P84022 425 aaKnown RBP13.17□□□□□ -0.3
CDHR3-205ENST00000468143 PTK7Q13308 1070 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 RASIP1Q5U651 963 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
CDHR3-205ENST00000468143 SEPT1Q8WYJ6 367 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 AIFM3Q96NN9 605 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 AGO4Q9HCK5 861 aaKnown RBP13.17□□□□□ -0.3
CDHR3-205ENST00000468143 SETD4Q9NVD3 440 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 MTMR10Q9NXD2 777 aa13.17□□□□□ -0.3
CDHR3-205ENST00000468143 RANBP2P49792 3224 aaKnown RBP13.17□□□□□ -0.3
CDHR3-205ENST00000468143 SCN10AQ9Y5Y9 1956 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 FAM86B1E9PN63 330 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 MEIS1O00470 390 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 TREHO43280 583 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 FAM86B2P0C5J1 330 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 CKBP12277 381 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 MARK3P27448 753 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 PBX2P40425 430 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 ITGB3BPQ13352 177 aaPredicted RBP13.16□□□□□ -0.3
CDHR3-205ENST00000468143 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 CPLX2Q6PUV4 134 aaKnown RBP13.16□□□□□ -0.3
CDHR3-205ENST00000468143 LRRC8DQ7L1W4 858 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 PLA2G4DQ86XP0 818 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 CCDC155Q8N6L0 562 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 CCDC148Q8NFR7 591 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 CAGE1Q8TC20 777 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 GLG1Q92896 1179 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 ATP6V0A1Q93050 837 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms