RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 USP2O75604 605 aaPredicted RBP5.7□□□□□ -1.5
SSR3-204ENST00000467733 DDNO94850 711 aaPredicted RBP5.7□□□□□ -1.5
SSR3-204ENST00000467733 ADRB1P08588 477 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 CHMP4BP1P59074 171 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 SLC14A2Q15849 920 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 C2CD5Q86YS7 1000 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 SYTL5Q8TDW5 730 aaPredicted RBP5.7□□□□□ -1.5
SSR3-204ENST00000467733 GIPC2Q8TF65 315 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 JARID2Q92833 1246 aaPredicted RBP5.7□□□□□ -1.5
SSR3-204ENST00000467733 CCDC74BQ96LY2 380 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 CARD11Q9BXL7 1154 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 TAOK3Q9H2K8 898 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 TAF1DQ9H5J8 278 aaPredicted RBP5.7□□□□□ -1.5
SSR3-204ENST00000467733 VTI1BQ9UEU0 232 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 CORINQ9Y5Q5 1042 aa5.7□□□□□ -1.5
SSR3-204ENST00000467733 SOS1Q07889 1333 aaPredicted RBP5.7□□□□□ -1.5
SSR3-204ENST00000467733 COL15A1P39059 1388 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 MKI67P46013 3256 aaKnown RBP5.69□□□□□ -1.5
SSR3-204ENST00000467733 CUL9Q8IWT3 2517 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 SHISA3A0PJX4 238 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 NOTOA8MTQ0 251 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 H0YIN7 160 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 HSP90AB1P08238 724 aaKnown RBP5.69□□□□□ -1.5
SSR3-204ENST00000467733 GALK1P51570 392 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 DEFB115Q30KQ5 88 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 MAP6Q96JE9 813 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 TESK2Q96S53 571 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 NOC4LQ9BVI4 516 aaKnown RBP5.69□□□□□ -1.5
SSR3-204ENST00000467733 LUC7LQ9NQ29 371 aaKnown RBP5.69□□□□□ -1.5
SSR3-204ENST00000467733 ZMYM5Q9UJ78 669 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 MRC1P22897 1456 aa5.69□□□□□ -1.5
SSR3-204ENST00000467733 IRS4O14654 1257 aaPredicted RBP5.68□□□□□ -1.5
SSR3-204ENST00000467733 SERPINB2P05120 415 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 RPL10P27635 214 aaKnown RBP5.68□□□□□ -1.5
SSR3-204ENST00000467733 VIPR1P32241 457 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 ECE1P42892 770 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 EPHB3P54753 998 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 YBX1P67809 324 aaKnown RBP5.68□□□□□ -1.5
SSR3-204ENST00000467733 RNF4P78317 190 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 NMIQ13287 307 aaPredicted RBP5.68□□□□□ -1.5
SSR3-204ENST00000467733 CEP128Q6ZU80 1094 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 SIRT2Q8IXJ6 389 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 PANK1Q8TE04 598 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 CAPNS2Q96L46 248 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 FAM161BQ96MY7 647 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 TEPSINQ96N21 525 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 ABT1Q9ULW3 272 aaKnown RBP5.68□□□□□ -1.5
SSR3-204ENST00000467733 WASHC2AQ641Q2 1341 aa5.68□□□□□ -1.5
SSR3-204ENST00000467733 ZC3H12DA2A288 527 aaKnown RBP5.67□□□□□ -1.5
SSR3-204ENST00000467733 CA12O43570 354 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 CILPO75339 1184 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 PNLIPP16233 465 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 ST13P50502 369 aaKnown RBP5.67□□□□□ -1.5
SSR3-204ENST00000467733 PCBP3P57721 371 aaKnown RBP5.67□□□□□ -1.5
SSR3-204ENST00000467733 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 TMEM62Q0P6H9 643 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 TAF1CQ15572 869 aaPredicted RBP5.67□□□□□ -1.5
SSR3-204ENST00000467733 SOGA3Q5TF21 947 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 CNTROBQ8N137 903 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 DAGLBQ8NCG7 672 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 FEZF2Q8TBJ5 459 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 CRELD1Q96HD1 420 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 HDAC8Q9BY41 377 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 CNTD2Q9H8S5 307 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 RNF19AQ9NV58 838 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 REV1Q9UBZ9 1251 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 NARFQ9UHQ1 456 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 HACL1Q9UJ83 578 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 ADAMTS20P59510 1910 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 AKAP11Q9UKA4 1901 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 ZNF541Q9H0D2 1346 aa5.67□□□□□ -1.5
SSR3-204ENST00000467733 SSU72P8A0A1W2PR75 194 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 PPM1GO15355 546 aaPredicted RBP5.66□□□□□ -1.5
SSR3-204ENST00000467733 EPHX2P34913 555 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 ARL4AP40617 200 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 ERVFRD-1P60508 538 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 NFKB2Q00653 900 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 TAGLNQ01995 201 aaKnown RBP5.66□□□□□ -1.5
SSR3-204ENST00000467733 ZNF530Q6P9A1 599 aaPredicted RBP5.66□□□□□ -1.5
SSR3-204ENST00000467733 CNKSR3Q6P9H4 555 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 PNMA8AQ86V59 439 aaPredicted RBP5.66□□□□□ -1.5
SSR3-204ENST00000467733 PHACTR4Q8IZ21 702 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 ZNF655Q8N720 491 aaPredicted RBP5.66□□□□□ -1.5
SSR3-204ENST00000467733 PHC3Q8NDX5 983 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 MZB1Q8WU39 189 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 ZNF622Q969S3 477 aaKnown RBP eCLIP5.66□□□□□ -1.5
SSR3-204ENST00000467733 GPR101Q96P66 508 aaPredicted RBP5.66□□□□□ -1.5
SSR3-204ENST00000467733 DDX21Q9NR30 783 aaKnown RBP eCLIP5.66□□□□□ -1.5
SSR3-204ENST00000467733 KLHL3Q9UH77 587 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 TCFL5Q9UL49 500 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 TLR6Q9Y2C9 796 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 A0A0C4DFX4 3053 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 HTTP42858 3142 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 CEP290O15078 2479 aa5.66□□□□□ -1.5
SSR3-204ENST00000467733 EFEMP2O95967 443 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 MPOP05164 745 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 CYP19A1P11511 503 aaPredicted RBP5.65□□□□□ -1.5
SSR3-204ENST00000467733 ENDOUP21128 410 aaKnown RBP5.65□□□□□ -1.5
SSR3-204ENST00000467733 MAP2K2P36507 400 aa5.65□□□□□ -1.5
SSR3-204ENST00000467733 EIF4A2Q14240 407 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms