RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 KRI1Q8N9T8 703 aaKnown RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 GPRASP2Q96D09 838 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 TTC12Q9H892 705 aaPredicted RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 MORC2Q9Y6X9 1032 aaPredicted RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 MKI67P46013 3256 aaKnown RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 MAFGO15525 162 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 ATP9AO75110 1047 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 XRCC5P13010 732 aaKnown RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 CYP2C19P33261 490 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 TECP42680 631 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 PSEN1P49768 467 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 SPECC1Q5M775 1068 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 FAM43BQ6ZT52 329 aaPredicted RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 FERMT2Q96AC1 680 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 AGO4Q9HCK5 861 aaKnown RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 LMBRD1Q9NUN5 540 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 SRRDQ9UH36 339 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 PCDHA12Q9UN75 941 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 POTEMA6NI47 508 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 HOXD10P28358 340 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 SP2Q02086 613 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 ITGB3BPQ13352 177 aaPredicted RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 LRCH2Q5VUJ6 765 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 OLFML2BQ68BL8 750 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 ADALQ6DHV7 355 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 MSL3Q8N5Y2 521 aaKnown RBP7.74□□□□□ -1.17
SCAF4-204ENST00000467731 TRIB2Q92519 343 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 SLC5A5Q92911 643 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 CDHR1Q96JP9 859 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 FAM20AQ96MK3 541 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 KATNBL1Q9H079 304 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 CSRNP2Q9H175 543 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 PDGFCQ9NRA1 345 aa7.74□□□□□ -1.17
SCAF4-204ENST00000467731 GOLGA6L4A6NEF3 574 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 SPATA31C2B4DYI2 1134 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 CUTAO60888 179 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 PSMD10O75832 226 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 ARIH2O95376 493 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 GNRH1P01148 92 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 KCNA2P16389 499 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 CDC25AP30304 524 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 ICAM3P32942 547 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 SPIRE1Q08AE8 756 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 TMEM266Q2M3C6 531 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 IGSF22Q8N9C0 903 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 ABHD16BQ9H3Z7 469 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 BCAS3Q9H6U6 928 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 VTA1Q9NP79 307 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 MYH9P35579 1960 aaKnown RBP7.73□□□□□ -1.17
SCAF4-204ENST00000467731 DDX11L8A8MPP1 907 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 DDX39AO00148 427 aaKnown RBP7.73□□□□□ -1.17
SCAF4-204ENST00000467731 DHX15O43143 795 aaKnown RBP7.73□□□□□ -1.17
SCAF4-204ENST00000467731 GAS7O60861 476 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 IGHA2P01877 340 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 UBA1P22314 1058 aaKnown RBP7.73□□□□□ -1.17
SCAF4-204ENST00000467731 FXR2P51116 673 aaKnown RBP eCLIP7.73□□□□□ -1.17
SCAF4-204ENST00000467731 ACVR2BQ13705 512 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 LY6KQ17RY6 165 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 PRAMEF19Q5SWL8 479 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 TMEM63BQ5T3F8 832 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 TAPT1Q6NXT6 567 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 SHC4Q6S5L8 630 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 USP49Q70CQ1 688 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 VAV3Q9UKW4 847 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 TRIM17Q9Y577 477 aa7.73□□□□□ -1.17
SCAF4-204ENST00000467731 PP2D1A8MPX8 630 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 FOXN1O15353 648 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 CHMP2AO43633 222 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 SORBS3O60504 671 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 TGFB3P10600 412 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 LONP1P36776 959 aaKnown RBP7.72□□□□□ -1.17
SCAF4-204ENST00000467731 ADCYAP1R1P41586 468 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 UBE2HP62256 183 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 IRF5Q13568 498 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 ARHGEF6Q15052 776 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 OTOP1Q7RTM1 612 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 SCFD2Q8WU76 684 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 EPSTI1Q96J88 318 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 RIT2Q99578 217 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 TEKT3Q9BXF9 490 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 GTPBP4Q9BZE4 634 aaKnown RBP7.72□□□□□ -1.17
SCAF4-204ENST00000467731 TBC1D22BQ9NU19 505 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 A0A1B0GVL5 298 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.72□□□□□ -1.17
SCAF4-204ENST00000467731 LETM1O95202 739 aaPredicted RBP7.72□□□□□ -1.17
SCAF4-204ENST00000467731 ELNP15502 786 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 PTGS1P23219 599 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 PPP2R5CQ13362 524 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 PDIA5Q14554 519 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 TTLL4Q14679 1199 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 RESP18Q5W5W9 173 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 CCDC62Q6P9F0 684 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 CYFIP1Q7L576 1253 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 ZNF579Q8NAF0 562 aaKnown RBP7.72□□□□□ -1.17
SCAF4-204ENST00000467731 RAET1EQ8TD07 263 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 SYMPKQ92797 1274 aaKnown RBP7.72□□□□□ -1.17
SCAF4-204ENST00000467731 SENP7Q9BQF6 1050 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 SDF4Q9BRK5 362 aa7.72□□□□□ -1.17
SCAF4-204ENST00000467731 RAB34Q9BZG1 259 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms