RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 SCLYQ96I15 445 aa20.79■□□□□ 0.92
CGREF1-208ENST00000467539 GPR20Q99678 358 aa20.79■□□□□ 0.92
CGREF1-208ENST00000467539 JADE2Q9NQC1 790 aa20.79■□□□□ 0.92
CGREF1-208ENST00000467539 H3BRB1 525 aa20.78■□□□□ 0.92
CGREF1-208ENST00000467539 NOP56O00567 594 aaKnown RBP20.78■□□□□ 0.92
CGREF1-208ENST00000467539 ATP9AO75110 1047 aa20.78■□□□□ 0.92
CGREF1-208ENST00000467539 IQCF3P0C7M6 154 aa20.78■□□□□ 0.92
CGREF1-208ENST00000467539 IFNAR1P17181 557 aa20.78■□□□□ 0.92
CGREF1-208ENST00000467539 RFC2P35250 354 aa20.78■□□□□ 0.92
CGREF1-208ENST00000467539 CLK2P49760 499 aaKnown RBP20.78■□□□□ 0.92
CGREF1-208ENST00000467539 TUT1Q9H6E5 874 aaKnown RBP20.78■□□□□ 0.92
CGREF1-208ENST00000467539 PFKMP08237 780 aa20.77■□□□□ 0.92
CGREF1-208ENST00000467539 KCNA2P16389 499 aa20.77■□□□□ 0.92
CGREF1-208ENST00000467539 CAGE1Q8TC20 777 aa20.77■□□□□ 0.92
CGREF1-208ENST00000467539 MXRA8Q9BRK3 442 aa20.77■□□□□ 0.92
CGREF1-208ENST00000467539 ZMYND12Q9H0C1 365 aa20.77■□□□□ 0.92
CGREF1-208ENST00000467539 SEMA6BQ9H3T3 888 aa20.77■□□□□ 0.92
CGREF1-208ENST00000467539 ESYT2A0FGR8 921 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 LGALS2P05162 132 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 CCT2P78371 535 aaKnown RBP20.76■□□□□ 0.91
CGREF1-208ENST00000467539 AKAP17AQ02040 695 aaKnown RBP20.76■□□□□ 0.91
CGREF1-208ENST00000467539 RBL2Q08999 1139 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 PTK7Q13308 1070 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 AP3B2Q13367 1082 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 MTMR1Q13613 665 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 MCTP2Q6DN12 878 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 OTOP2Q7RTS6 562 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 CCDC155Q8N6L0 562 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 CCDC12Q8WUD4 166 aaPredicted RBP20.76■□□□□ 0.91
CGREF1-208ENST00000467539 PHKBQ93100 1093 aa20.76■□□□□ 0.91
CGREF1-208ENST00000467539 RNF26Q9BY78 433 aaPredicted RBP20.76■□□□□ 0.91
CGREF1-208ENST00000467539 MTIF3Q9H2K0 278 aaKnown RBP20.76■□□□□ 0.91
CGREF1-208ENST00000467539 EIF5BO60841 1220 aaKnown RBP20.75■□□□□ 0.91
CGREF1-208ENST00000467539 ANAPC15P60006 121 aa20.75■□□□□ 0.91
CGREF1-208ENST00000467539 ZNF697Q5TEC3 545 aa20.75■□□□□ 0.91
CGREF1-208ENST00000467539 AFAP1L1Q8TED9 768 aa20.75■□□□□ 0.91
CGREF1-208ENST00000467539 SEPT1Q8WYJ6 367 aa20.75■□□□□ 0.91
CGREF1-208ENST00000467539 ANO3Q9BYT9 981 aa20.75■□□□□ 0.91
CGREF1-208ENST00000467539 UPF3BQ9BZI7 483 aaKnown RBP20.75■□□□□ 0.91
CGREF1-208ENST00000467539 C6orf50Q9HD87 102 aa20.75■□□□□ 0.91
CGREF1-208ENST00000467539 PDRG1Q9NUG6 133 aa20.75■□□□□ 0.91
CGREF1-208ENST00000467539 TMEM260Q9NX78 707 aa20.75■□□□□ 0.91
CGREF1-208ENST00000467539 CXXC1Q9P0U4 656 aaPredicted RBP20.75■□□□□ 0.91
CGREF1-208ENST00000467539 MEIS1O00470 390 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 PARNO95453 639 aaKnown RBP20.74■□□□□ 0.91
CGREF1-208ENST00000467539 GNA11P29992 359 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 HOXC8P31273 242 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 SREBF1P36956 1147 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 ZNF200P98182 395 aaPredicted RBP20.74■□□□□ 0.91
CGREF1-208ENST00000467539 HIC1Q14526 733 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 CEP55Q53EZ4 464 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 DEFB128Q7Z7B8 93 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 CYP2W1Q8TAV3 490 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 DHX38Q92620 1227 aaKnown RBP20.74■□□□□ 0.91
CGREF1-208ENST00000467539 PGBD1Q96JS3 809 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 RNPEPQ9H4A4 650 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 NCOA5Q9HCD5 579 aaKnown RBP20.74■□□□□ 0.91
CGREF1-208ENST00000467539 KCNH7Q9NS40 1196 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 TELO2Q9Y4R8 837 aa20.74■□□□□ 0.91
CGREF1-208ENST00000467539 TMEM265A0A087WTH1 108 aa20.73■□□□□ 0.91
CGREF1-208ENST00000467539 GSTTP1A0A1W2PQM5 241 aa20.73■□□□□ 0.91
CGREF1-208ENST00000467539 CKBP12277 381 aa20.73■□□□□ 0.91
CGREF1-208ENST00000467539 SELPP16109 830 aa20.73■□□□□ 0.91
CGREF1-208ENST00000467539 JAKMIP3Q5VZ66 844 aa20.73■□□□□ 0.91
CGREF1-208ENST00000467539 SLC26A6Q9BXS9 759 aa20.73■□□□□ 0.91
CGREF1-208ENST00000467539 STXBP5LQ9Y2K9 1186 aa20.73■□□□□ 0.91
CGREF1-208ENST00000467539 C17orf102A2RUQ5 167 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 GRXCR1A8MXD5 290 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 CYP3A4P08684 503 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 SMIM10L2AP0DMW4 78 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 SMIM10L2BP0DMW5 78 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 GPNMBQ14956 572 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 TRIM71Q2Q1W2 868 aaKnown RBP20.72■□□□□ 0.91
CGREF1-208ENST00000467539 UTP14CQ5TAP6 766 aaKnown RBP20.72■□□□□ 0.91
CGREF1-208ENST00000467539 NIPA1Q7RTP0 329 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 CRYGNQ8WXF5 182 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 IL17RAQ96F46 866 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 LARP6Q9BRS8 491 aaKnown RBP20.72■□□□□ 0.91
CGREF1-208ENST00000467539 TTYH1Q9H313 450 aaPredicted RBP20.72■□□□□ 0.91
CGREF1-208ENST00000467539 SH3GLB2Q9NR46 395 aa20.72■□□□□ 0.91
CGREF1-208ENST00000467539 ZNF215Q9UL58 517 aaPredicted RBP20.72■□□□□ 0.91
CGREF1-208ENST00000467539 ARP10275 920 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 GNAT1P11488 350 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 ACTN1P12814 892 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 DNAJB2P25686 324 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 TCF7P36402 384 aaPredicted RBP20.71■□□□□ 0.91
CGREF1-208ENST00000467539 ZNF76P36508 570 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 ARHGAP4P98171 946 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 SP4Q02446 784 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 SSRP1Q08945 709 aaKnown RBP20.71■□□□□ 0.91
CGREF1-208ENST00000467539 SERINC5Q86VE9 423 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 BICD2Q8TD16 824 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 ATP6V0A1Q93050 837 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 FAM161BQ96MY7 647 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 GUCD1Q96NT3 240 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 FTOQ9C0B1 505 aaKnown RBP eCLIP20.71■□□□□ 0.91
CGREF1-208ENST00000467539 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 NFASCO94856 1347 aa20.71■□□□□ 0.91
CGREF1-208ENST00000467539 ADAMTS3O15072 1205 aa20.7■□□□□ 0.9
CGREF1-208ENST00000467539 PPFIA3O75145 1194 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms