RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 ASH2LQ9UBL3 628 aa7.5□□□□□ -1.21
ATG3-204ENST00000467275 SLC27A2O14975 620 aa7.49□□□□□ -1.21
ATG3-204ENST00000467275 INSRRP14616 1297 aa7.49□□□□□ -1.21
ATG3-204ENST00000467275 TMC5Q6UXY8 1006 aa7.49□□□□□ -1.21
ATG3-204ENST00000467275 FGFR1P11362 822 aa7.48□□□□□ -1.21
ATG3-204ENST00000467275 MLLT6P55198 1093 aaPredicted RBP7.48□□□□□ -1.21
ATG3-204ENST00000467275 GRIN1Q05586 938 aa7.48□□□□□ -1.21
ATG3-204ENST00000467275 KCNT2Q6UVM3 1135 aa7.48□□□□□ -1.21
ATG3-204ENST00000467275 GLB1LQ6UWU2 654 aa7.48□□□□□ -1.21
ATG3-204ENST00000467275 NSMFQ6X4W1 530 aa7.48□□□□□ -1.21
ATG3-204ENST00000467275 ST13P5Q8NFI4 369 aaPredicted RBP7.48□□□□□ -1.21
ATG3-204ENST00000467275 TRIM55Q9BYV6 548 aa7.48□□□□□ -1.21
ATG3-204ENST00000467275 ARHGEF4Q9NR80 690 aa7.48□□□□□ -1.21
ATG3-204ENST00000467275 TRAV20A0A0B4J274 112 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 PABPC1P11940 636 aaKnown RBP7.47□□□□□ -1.21
ATG3-204ENST00000467275 GRK2P25098 689 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 GRK3P35626 688 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 SPIRE1Q08AE8 756 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 SURF1Q15526 300 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 KIZQ2M2Z5 673 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 TRMT10BQ6PF06 316 aaKnown RBP7.47□□□□□ -1.21
ATG3-204ENST00000467275 LBX2Q6XYB7 198 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 OTOP3Q7RTS5 596 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 PLEKHH3Q7Z736 793 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 LRRC47Q8N1G4 583 aaKnown RBP7.47□□□□□ -1.21
ATG3-204ENST00000467275 YTHDC1Q96MU7 727 aaKnown RBP7.47□□□□□ -1.21
ATG3-204ENST00000467275 SAMD11Q96NU1 681 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 KCNJ15Q99712 375 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 FTSJ1Q9UET6 329 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 NUB1Q9Y5A7 615 aa7.47□□□□□ -1.21
ATG3-204ENST00000467275 B4GALT3O60512 393 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 GNAT1P11488 350 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 ADAM17P78536 824 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 IFRD2Q12894 506 aaPredicted RBP7.46□□□□□ -1.22
ATG3-204ENST00000467275 RAB33AQ14088 237 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 PUM1Q14671 1186 aaKnown RBP eCLIP7.46□□□□□ -1.222e-6■■■□□ 16.7
ATG3-204ENST00000467275 VASNQ6EMK4 673 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 RBM12BQ8IXT5 1001 aaKnown RBP7.46□□□□□ -1.22
ATG3-204ENST00000467275 IFNL3Q8IZI9 196 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 CHST13Q8NET6 341 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 TTLL11Q8NHH1 800 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 CLEC4DQ8WXI8 215 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 OSBP2Q969R2 916 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 ZFYVE21Q9BQ24 234 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 RBPJLQ9UBG7 517 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 WASF3Q9UPY6 502 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 MYRFQ9Y2G1 1151 aa7.46□□□□□ -1.22
ATG3-204ENST00000467275 LAMTOR5O43504 91 aa7.45□□□□□ -1.22
ATG3-204ENST00000467275 COL6A2P12110 1019 aa7.45□□□□□ -1.22
ATG3-204ENST00000467275 GPR85P60893 370 aa7.45□□□□□ -1.22
ATG3-204ENST00000467275 TUSC3Q13454 348 aa7.45□□□□□ -1.22
ATG3-204ENST00000467275 NTRK3Q16288 839 aa7.45□□□□□ -1.22
ATG3-204ENST00000467275 ZCCHC14Q8WYQ9 949 aaKnown RBP7.45□□□□□ -1.22
ATG3-204ENST00000467275 C8orf49Q96NF6 230 aa7.45□□□□□ -1.22
ATG3-204ENST00000467275 HSPBP1Q9NZL4 362 aa7.45□□□□□ -1.22
ATG3-204ENST00000467275 BLACEA4D250 179 aa7.44□□□□□ -1.22
ATG3-204ENST00000467275 U2SURPO15042 1029 aaKnown RBP7.44□□□□□ -1.22
ATG3-204ENST00000467275 STK10O94804 968 aaKnown RBP7.44□□□□□ -1.22
ATG3-204ENST00000467275 STYK1Q6J9G0 422 aa7.44□□□□□ -1.22
ATG3-204ENST00000467275 DPH6Q7L8W6 267 aa7.44□□□□□ -1.22
ATG3-204ENST00000467275 LIMS2Q7Z4I7 341 aa7.44□□□□□ -1.22
ATG3-204ENST00000467275 CKAP2LQ8IYA6 745 aa7.44□□□□□ -1.22
ATG3-204ENST00000467275 TTC9BQ8N6N2 239 aa7.44□□□□□ -1.22
ATG3-204ENST00000467275 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.44□□□□□ -1.22
ATG3-204ENST00000467275 ZDHHC9Q9Y397 364 aa7.44□□□□□ -1.22
ATG3-204ENST00000467275 SOD2P04179 222 aa7.43□□□□□ -1.22
ATG3-204ENST00000467275 PAN2Q504Q3 1202 aaKnown RBP7.43□□□□□ -1.22
ATG3-204ENST00000467275 YOD1Q5VVQ6 348 aaPredicted RBP7.43□□□□□ -1.22
ATG3-204ENST00000467275 CPZQ66K79 652 aa7.43□□□□□ -1.22
ATG3-204ENST00000467275 KBTBD2Q8IY47 623 aa7.43□□□□□ -1.22
ATG3-204ENST00000467275 UHMK1Q8TAS1 419 aaKnown RBP7.43□□□□□ -1.22
ATG3-204ENST00000467275 MBD6Q96DN6 1003 aa7.43□□□□□ -1.22
ATG3-204ENST00000467275 BARX1Q9HBU1 254 aaPredicted RBP7.43□□□□□ -1.22
ATG3-204ENST00000467275 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
ATG3-204ENST00000467275 DLL4Q9NR61 685 aa7.43□□□□□ -1.22
ATG3-204ENST00000467275 PPP1R1BQ9UD71 204 aaPredicted RBP7.43□□□□□ -1.22
ATG3-204ENST00000467275 DSEQ9UL01 958 aa7.43□□□□□ -1.22
ATG3-204ENST00000467275 NPEPPSL1A6NEC2 478 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 FAM47E-STBD1D6RA91 191 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 NKRFO15226 690 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATG3-204ENST00000467275 FBXO21O94952 628 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 LTFP02788 710 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 FAHP16930 419 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 PHF19Q5T6S3 580 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 ARHGEF18Q6ZSZ5 1173 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 PROSER1Q86XN7 944 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 KLHL36Q8N4N3 616 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 DTX3Q8N9I9 347 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 ZNF669Q96BR6 464 aaPredicted RBP7.42□□□□□ -1.22
ATG3-204ENST00000467275 ALG1Q9BT22 464 aa7.42□□□□□ -1.22
ATG3-204ENST00000467275 B4GALT4O60513 344 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 CKMP06732 381 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 PPP2CBP62714 309 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 PPP2CAP67775 309 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 NFATC3Q12968 1075 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 PKN3Q6P5Z2 889 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.41□□□□□ -1.22
ATG3-204ENST00000467275 IGDCC4Q8TDY8 1250 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 SPATA9Q9BWV2 254 aa7.41□□□□□ -1.22
ATG3-204ENST00000467275 SSBP3Q9BWW4 388 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms