RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 LAMTOR5O43504 91 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 CYP1A1P04798 512 aaPredicted RBP7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 PPP2R2AP63151 447 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 PLEKHH3Q7Z736 793 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 KCTD13Q8WZ19 329 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 ZSWIM3Q96MP5 696 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 WRNIP1Q96S55 665 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 TMEM168Q9H0V1 697 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 L2HGDHQ9H9P8 463 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 GPR27Q9NS67 375 aa7.02□□□□□ -1.29
PRPF40A-205ENST00000467114 A0A1W2PQU0 124 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 AGRPO00253 132 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 MAFKO60675 156 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 SERINC3Q13530 473 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 LIMS2Q7Z4I7 341 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 TTLL11Q8NHH1 800 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 ZCCHC14Q8WYQ9 949 aaKnown RBP7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 SLC6A20Q9NP91 592 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 PPP4R1LQ9P1A2 415 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 ASH2LQ9UBL3 628 aa7.01□□□□□ -1.29
PRPF40A-205ENST00000467114 ATP2B1P20020 1258 aa7□□□□□ -1.29
PRPF40A-205ENST00000467114 SF3A1Q15459 793 aaKnown RBP7□□□□□ -1.29
PRPF40A-205ENST00000467114 ANKS3Q6ZW76 656 aa7□□□□□ -1.29
PRPF40A-205ENST00000467114 TRIM48Q8IWZ4 208 aa7□□□□□ -1.29
PRPF40A-205ENST00000467114 CELF2-AS1Q8N7Q2 184 aa7□□□□□ -1.29
PRPF40A-205ENST00000467114 CHST13Q8NET6 341 aa7□□□□□ -1.29
PRPF40A-205ENST00000467114 HNRNPLLQ8WVV9 542 aaKnown RBP7□□□□□ -1.29
PRPF40A-205ENST00000467114 DVL3Q92997 716 aaPredicted RBP7□□□□□ -1.29
PRPF40A-205ENST00000467114 KRIT1O00522 736 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 DLX3O60479 287 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 EPHB4P54760 987 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 ZXDAP98168 799 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 RAB33AQ14088 237 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 RSPO2Q6UXX9 243 aaPredicted RBP6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 PROSER1Q86XN7 944 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 KLHL36Q8N4N3 616 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 IER2Q9BTL4 223 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 ST6GALNAC2Q9UJ37 374 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 CROTQ9UKG9 612 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 MSRB2Q9Y3D2 182 aa6.99□□□□□ -1.29
PRPF40A-205ENST00000467114 MSCO60682 206 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 COL6A1P12109 1028 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 NBPF6Q5VWK0 638 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 TMC5Q6UXY8 1006 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 IGDCC4Q8TDY8 1250 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 SGSM3Q96HU1 749 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 NBPF4Q96M43 638 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 JAM3Q9BX67 310 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 PDGFDQ9GZP0 370 aaPredicted RBP6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 FTSJ1Q9UET6 329 aa6.98□□□□□ -1.29
PRPF40A-205ENST00000467114 PPP2CBP62714 309 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 PPP2CAP67775 309 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 KBTBD2Q8IY47 623 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 DNERQ8NFT8 737 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 PIP4K2CQ8TBX8 421 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 CLEC4DQ8WXI8 215 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 DRC1Q96MC2 740 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 PHF20Q9BVI0 1012 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 CD248Q9HCU0 757 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 RBPJLQ9UBG7 517 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 PPARGC1AQ9UBK2 798 aaKnown RBP6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 TSC22D4Q9Y3Q8 395 aa6.97□□□□□ -1.29
PRPF40A-205ENST00000467114 NPEPPSL1A6NEC2 478 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 SLC27A2O14975 620 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 GPR42O15529 346 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 NFATC3Q12968 1075 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 HSP90AA2PQ14568 343 aaPredicted RBP6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 ICAM4Q14773 271 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 CDSNQ15517 529 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 DDR2Q16832 855 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 TRMT10BQ6PF06 316 aaKnown RBP6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 DTX3Q8N9I9 347 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 DLL4Q9NR61 685 aa6.96□□□□□ -1.3
PRPF40A-205ENST00000467114 AKAP8O43823 692 aaKnown RBP6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 CHGBP05060 677 aa6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 GTF2F1P35269 517 aaKnown RBP eCLIP6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 ARHGEF18Q6ZSZ5 1173 aa6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 USP53Q70EK8 1073 aa6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 OTOP3Q7RTS5 596 aa6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 DCAF4Q8WV16 495 aa6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 BARX1Q9HBU1 254 aaPredicted RBP6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 ST7Q9NRC1 585 aa6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 R3HCC1Q9Y3T6 440 aaKnown RBP6.95□□□□□ -1.3
PRPF40A-205ENST00000467114 KLHL18O94889 574 aa6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 FGFR1P11362 822 aa6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 GRIN1Q05586 938 aa6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 HABP4Q5JVS0 413 aaKnown RBP6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 SLFN13Q68D06 897 aa6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 VASNQ6EMK4 673 aa6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 LBX2Q6XYB7 198 aa6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 CIR1Q86X95 450 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 UHMK1Q8TAS1 419 aaKnown RBP6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 UBXN4Q92575 508 aa6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 KISS1RQ969F8 398 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 ZFYVE21Q9BQ24 234 aa6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 AARSD1Q9BTE6 412 aaKnown RBP6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 HIRIP3Q9BW71 556 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-205ENST00000467114 IQCA1LA6NCM1 817 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms