RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 ZMYM6O95789 1325 aa16.87■□□□□ 0.29
CXCR4-203ENST00000466288 SALL3Q9BXA9 1300 aa16.87■□□□□ 0.29
CXCR4-203ENST00000466288 GGPS1O95749 300 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 CTSHP09668 335 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 SMIM10L2AP0DMW4 78 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 SMIM10L2BP0DMW5 78 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 PCP11498 1178 aaKnown RBP16.86■□□□□ 0.29
CXCR4-203ENST00000466288 GTF2F1P35269 517 aaKnown RBP eCLIP16.86■□□□□ 0.29
CXCR4-203ENST00000466288 BMPR1AP36894 532 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 SMAD4Q13485 552 aaKnown RBP16.86■□□□□ 0.29
CXCR4-203ENST00000466288 KCNV1Q6PIU1 500 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 MFSD6Q6ZSS7 791 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 FIBCD1Q8N539 461 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 FAM227BQ96M60 508 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 PDCD2LQ9BRP1 358 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 ZKSCAN3Q9BRR0 538 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 RNPEPQ9H4A4 650 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 MYO7AQ13402 2215 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 KIAA1217Q5T5P2 1943 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 H3BRB1 525 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 STXBP3O00186 592 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 ST18O60284 1047 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 CFBP00751 764 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 UBA1P22314 1058 aaKnown RBP16.86■□□□□ 0.29
CXCR4-203ENST00000466288 HSD17B4P51659 736 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 PTPN5P54829 565 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 GHRHRQ02643 423 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 PNMA1Q8ND90 353 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 APBB2Q92870 758 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 EVI5LQ96CN4 794 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 C11orf84Q9BUA3 381 aaPredicted RBP16.86■□□□□ 0.29
CXCR4-203ENST00000466288 TUT1Q9H6E5 874 aaKnown RBP16.86■□□□□ 0.29
CXCR4-203ENST00000466288 JMJD4Q9H9V9 463 aa16.86■□□□□ 0.29
CXCR4-203ENST00000466288 DMDP11532 3685 aa16.85■□□□□ 0.29
CXCR4-203ENST00000466288 LINC01565O15544 149 aa16.85■□□□□ 0.29
CXCR4-203ENST00000466288 MYCLP12524 364 aaPredicted RBP16.85■□□□□ 0.29
CXCR4-203ENST00000466288 TCF15Q12870 199 aa16.85■□□□□ 0.29
CXCR4-203ENST00000466288 MCMDC2Q4G0Z9 681 aa16.85■□□□□ 0.29
CXCR4-203ENST00000466288 TRIM67Q6ZTA4 783 aa16.85■□□□□ 0.29
CXCR4-203ENST00000466288 STOX1Q6ZVD7 989 aa16.85■□□□□ 0.29
CXCR4-203ENST00000466288 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
CXCR4-203ENST00000466288 VSIG10LQ86VR7 867 aa16.85■□□□□ 0.29
CXCR4-203ENST00000466288 GPKOWQ92917 476 aaPredicted RBP eCLIP16.85■□□□□ 0.29
CXCR4-203ENST00000466288 CLP1Q92989 425 aaKnown RBP16.85■□□□□ 0.29
CXCR4-203ENST00000466288 RC3H2Q9HBD1 1191 aaKnown RBP16.85■□□□□ 0.29
CXCR4-203ENST00000466288 CD207Q9UJ71 328 aa16.85■□□□□ 0.29
CXCR4-203ENST00000466288 NEDD4P46934 1319 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 TMEM221A6NGB7 291 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 M0R296 226 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 TGFB3P10600 412 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 FAM26DQ5JW98 314 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 IL31RAQ8NI17 732 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 ESR2Q92731 530 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 PBXIP1Q96AQ6 731 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 MSLNLQ96KJ4 702 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 IGFLR1Q9H665 355 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 BCAS3Q9H6U6 928 aa16.84■□□□□ 0.29
CXCR4-203ENST00000466288 EYA4O95677 639 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 LGALS2P05162 132 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 ADAM15Q13444 863 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 CAMK1Q14012 370 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 PGM5Q15124 567 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 PKN1Q16512 942 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 ASPRV1Q53RT3 343 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 PRRX2Q99811 253 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 MLXIPQ9HAP2 919 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 VAT1LQ9HCJ6 419 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 ALG13Q9NP73 1137 aaKnown RBP16.83■□□□□ 0.28
CXCR4-203ENST00000466288 RWDD3Q9Y3V2 267 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 ADGRA3Q8IWK6 1321 aa16.83■□□□□ 0.28
CXCR4-203ENST00000466288 MMP1P03956 469 aa16.82■□□□□ 0.28
CXCR4-203ENST00000466288 ADAM17P78536 824 aa16.82■□□□□ 0.28
CXCR4-203ENST00000466288 ZFP91Q96JP5 570 aaPredicted RBP16.82■□□□□ 0.28
CXCR4-203ENST00000466288 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
CXCR4-203ENST00000466288 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
CXCR4-203ENST00000466288 MAP3K20Q9NYL2 800 aaKnown RBP16.82■□□□□ 0.28
CXCR4-203ENST00000466288 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
CXCR4-203ENST00000466288 LOC730098B7Z3J9 87 aa16.81■□□□□ 0.28
CXCR4-203ENST00000466288 DHX16O60231 1041 aaKnown RBP16.81■□□□□ 0.28
CXCR4-203ENST00000466288 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
CXCR4-203ENST00000466288 ZXDAP98168 799 aa16.81■□□□□ 0.28
CXCR4-203ENST00000466288 ZNF689Q96CS4 500 aaPredicted RBP16.81■□□□□ 0.28
CXCR4-203ENST00000466288 AMNQ9BXJ7 453 aa16.81■□□□□ 0.28
CXCR4-203ENST00000466288 KAT14Q9H8E8 782 aa16.81■□□□□ 0.28
CXCR4-203ENST00000466288 RALGAPA2Q2PPJ7 1873 aa16.81■□□□□ 0.28
CXCR4-203ENST00000466288 VPS13AQ96RL7 3174 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 CSPG5O95196 566 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 CHRNA1P02708 482 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 PARP1P09874 1014 aaKnown RBP16.8■□□□□ 0.28
CXCR4-203ENST00000466288 GNAT1P11488 350 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
CXCR4-203ENST00000466288 IQCA1Q86XH1 822 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 USP26Q9BXU7 913 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 EHMT1Q9H9B1 1298 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 CLEC1BQ9P126 229 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 PLAGL2Q9UPG8 496 aa16.8■□□□□ 0.28
CXCR4-203ENST00000466288 CCDC171Q6TFL3 1326 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms