RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ZSWIM8A7E2V4 1837 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 ANKRD18BA2A2Z9 1011 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 FAM170BA6NMN3 283 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 TAF5LO75529 589 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 ECEL1O95672 775 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 NFICP08651 508 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 HIBADHP31937 336 aaKnown RBP7.4□□□□□ -1.22
NCL-208ENST00000466274 RGS2P41220 211 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 RIPK4P57078 832 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 NHLH1Q02575 133 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 POU4F3Q15319 338 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 MFSD14CQ5VZR4 134 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 CCDC129Q6ZRS4 1044 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 ZAR1Q86SH2 424 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 ARRDC4Q8NCT1 418 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 TDRD7Q8NHU6 1098 aaKnown RBP7.4□□□□□ -1.22
NCL-208ENST00000466274 HERVK_113Q902F9 699 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 LPAR1Q92633 364 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 PLEKHF1Q96S99 279 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 CCDC39Q9UFE4 941 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 AFG3L2Q9Y4W6 797 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 ACTL7BQ9Y614 415 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 TACC3Q9Y6A5 838 aa7.4□□□□□ -1.22
NCL-208ENST00000466274 KBTBD13C9JR72 458 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 PI4K2BG5E9Z4 385 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 ERC2O15083 957 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 CYP26A1O43174 497 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 ICMTO60725 284 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 FRAT2O75474 233 aaPredicted RBP7.39□□□□□ -1.23
NCL-208ENST00000466274 CYP11A1P05108 521 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 CCND3P30281 292 aaPredicted RBP7.39□□□□□ -1.23
NCL-208ENST00000466274 MAPK4P31152 587 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 ECM1Q16610 540 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 SLC39A5Q6ZMH5 540 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 NFXL1Q6ZNB6 911 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 DYMQ7RTS9 669 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 VPS37DQ86XT2 251 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 GATA6Q92908 595 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 UIMC1Q96RL1 719 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 DDX20Q9UHI6 824 aaKnown RBP7.39□□□□□ -1.23
NCL-208ENST00000466274 MSRAQ9UJ68 235 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 BRPF3Q9ULD4 1205 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 COG5Q9UP83 839 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 SUGT1Q9Y2Z0 365 aa7.39□□□□□ -1.23
NCL-208ENST00000466274 LAS1LQ9Y4W2 734 aaKnown RBP7.39□□□□□ -1.23
NCL-208ENST00000466274 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
NCL-208ENST00000466274 BDP1A6H8Y1 2624 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 FAM86C2PA6NEL3 165 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 TRIM75PA6NK02 468 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 CHL1O00533 1208 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
NCL-208ENST00000466274 RAG1P15918 1043 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 RAB6AP20340 208 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 CNGA1P29973 690 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 FPGSQ05932 587 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 RAB30Q15771 203 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 CPSF6Q16630 551 aaKnown RBP eCLIP7.38□□□□□ -1.23
NCL-208ENST00000466274 GPRC5AQ8NFJ5 357 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 APBA2Q99767 749 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 YIPF2Q9BWQ6 316 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 CWC22Q9HCG8 908 aaKnown RBP7.38□□□□□ -1.23
NCL-208ENST00000466274 PDLIM7Q9NR12 457 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 RAD18Q9NS91 495 aa7.38□□□□□ -1.23
NCL-208ENST00000466274 TRIM43BA6NCK2 446 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 SNAP23O00161 211 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 CTNND1O60716 968 aaKnown RBP7.37□□□□□ -1.23
NCL-208ENST00000466274 GLRX3O76003 335 aaKnown RBP7.37□□□□□ -1.23
NCL-208ENST00000466274 ALADP13716 330 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 PPP2R1AP30153 589 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 SERPINB4P48594 390 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 TCP10Q12799 353 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 IFIT5Q13325 482 aaKnown RBP7.37□□□□□ -1.23
NCL-208ENST00000466274 KRT24Q2M2I5 525 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 TRIM60Q495X7 471 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 TAF7LQ5H9L4 462 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 DUSP27Q5VZP5 1158 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 APOBEC3HQ6NTF7 200 aaKnown RBP7.37□□□□□ -1.23
NCL-208ENST00000466274 HHIPL2Q6UWX4 724 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 ERICH6Q7L0X2 663 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 TRIM43Q96BQ3 446 aaPredicted RBP7.37□□□□□ -1.23
NCL-208ENST00000466274 TRIM56Q9BRZ2 755 aaKnown RBP7.37□□□□□ -1.23
NCL-208ENST00000466274 PLA2G12BQ9BX93 195 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 SLC28A3Q9HAS3 691 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 FAM105AQ9NUU6 356 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 MORF4L1Q9UBU8 362 aa7.37□□□□□ -1.23
NCL-208ENST00000466274 DDX60LQ5H9U9 1706 aaKnown RBP7.36□□□□□ -1.23
NCL-208ENST00000466274 H3BRB1 525 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 PLIN1O60240 522 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 PRNPP04156 253 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 CSF1RP07333 972 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 CLTBP09497 229 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 KCNQ1P51787 676 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 IRX3P78415 501 aaPredicted RBP7.36□□□□□ -1.23
NCL-208ENST00000466274 TFF2Q03403 129 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 CHAF1AQ13111 956 aaPredicted RBP7.36□□□□□ -1.23
NCL-208ENST00000466274 ORC1Q13415 861 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 UBE4AQ14139 1066 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 SNX17Q15036 470 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 CAVIN4Q5BKX8 364 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 KIAA0319Q5VV43 1072 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms