RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 DEXIO95424 95 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 ITGB8P26012 769 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 ZNF76P36508 570 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 LAMC2Q13753 1193 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 ANKRD1Q15327 319 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 NBPF20Q3BBV1 942 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 CELF3Q5SZQ8 465 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 C1orf53Q5VUE5 145 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 KCNV1Q6PIU1 500 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 INPP4AQ96PE3 977 aaPredicted RBP11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 TRMT13Q9NUP7 481 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 TELO2Q9Y4R8 837 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 DNAH12Q6ZR08 3092 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 DDX39AO00148 427 aaKnown RBP11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 STAM2O75886 525 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 CYP2C9P11712 490 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 ITGB5P18084 799 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 CLK2P49760 499 aaKnown RBP11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 CDK7P50613 346 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 CLCN6P51797 869 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 AP3B2Q13367 1082 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 MTMR1Q13613 665 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 DGKDQ16760 1214 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 ME3Q16798 604 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 MYSM1Q5VVJ2 828 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 ANKRD33Q7Z3H0 272 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 REXO1Q8N1G1 1221 aaKnown RBP11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 PPTC7Q8NI37 304 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 C22orf23Q9BZE7 217 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 TRPV6Q9H1D0 765 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 NOD1Q9Y239 953 aa11.12□□□□□ -0.63
RTFDC1-205ENST00000466260 UMODL1Q5DID0 1318 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 GBF1Q92538 1859 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 MYH9P35579 1960 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 SPATA31C2B4DYI2 1134 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 KPNA6O60684 536 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 PFKFB2O60825 505 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 ATP9AO75110 1047 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 CDKL5O76039 1030 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 GNA11P29992 359 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 ICAM3P32942 547 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 CYP2C18P33260 490 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 PSEN2P49810 448 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 CCL23P55773 120 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 ARHGAP4P98171 946 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 NEDD9Q14511 834 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 MFSD10Q14728 455 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 CYP2W1Q8TAV3 490 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 GPRASP2Q96D09 838 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 MXRA8Q9BRK3 442 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 ZMYND12Q9H0C1 365 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 KCNJ14Q9UNX9 436 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 UBIAD1Q9Y5Z9 338 aa11.11□□□□□ -0.63
RTFDC1-205ENST00000466260 ESYT2A0FGR8 921 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 KIAA0355O15063 1070 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 FOSP01100 380 aaPredicted RBP11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 CD4P01730 458 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 LGALS2P05162 132 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 ARP10275 920 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 TGFB3P10600 412 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 SREBF1P36956 1147 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 FPGSQ05932 587 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 KIAA0753Q2KHM9 967 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 XRRA1Q6P2D8 792 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 TDHQ8IZJ6 230 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 BICD2Q8TD16 824 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 KAT2BQ92831 832 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 GTF3C6Q969F1 213 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 TOX2Q96NM4 488 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 KATNAL1Q9BW62 490 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 PRO3102Q9H379 93 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 HIPK3Q9H422 1215 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 JADE2Q9NQC1 790 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 ORC3Q9UBD5 711 aaPredicted RBP11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 HDAC6Q9UBN7 1215 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 TBX21Q9UL17 535 aa11.1□□□□□ -0.63
RTFDC1-205ENST00000466260 JAK2O60674 1132 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 TIMP1P01033 207 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 ACRP10323 421 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 KCNA2P16389 499 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 MARK3P27448 753 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 TCF7P36402 384 aaPredicted RBP11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 PTGISQ16647 500 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 C9orf50Q5SZB4 431 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 GDF6Q6KF10 455 aaPredicted RBP11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 METTL7BQ6UX53 244 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 PLA2G4DQ86XP0 818 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 BLIDQ8IZY5 108 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms