RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 CTAGE5O15320 804 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 CCNT1O60563 726 aaKnown RBP18.07■□□□□ 0.48
AGRN-204ENST00000466223 ATP9AO75110 1047 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 COL6A1P12109 1028 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 GCFC2P16383 781 aaKnown RBP18.07■□□□□ 0.48
AGRN-204ENST00000466223 KCNA2P16389 499 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 IRX5P78411 483 aaPredicted RBP18.07■□□□□ 0.48
AGRN-204ENST00000466223 BECN1Q14457 450 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 CCSAPQ6IQ19 270 aaPredicted RBP18.07■□□□□ 0.48
AGRN-204ENST00000466223 UBE2Q1Q7Z7E8 422 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 AGO4Q9HCK5 861 aaKnown RBP18.07■□□□□ 0.48
AGRN-204ENST00000466223 STARD7Q9NQZ5 370 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 TBC1D22BQ9NU19 505 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
AGRN-204ENST00000466223 NFASCO94856 1347 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 ELP1O95163 1332 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 IGLV3-22A0A075B6J6 115 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 CYP3A7-CYP3A51PA0A087WV96 503 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 A0A1W2PQ45 241 aaPredicted RBP18.06■□□□□ 0.48
AGRN-204ENST00000466223 A0A1W2PQY0 241 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 IPO5O00410 1097 aaKnown RBP18.06■□□□□ 0.48
AGRN-204ENST00000466223 MARCH6O60337 910 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 PPFIA4O75335 1185 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 MMP3P08254 477 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 CYP3A7P24462 503 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 Q4G0T1 1027 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 PPP4R3AQ6IN85 833 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 CXCL17Q6UXB2 119 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 TNFRSF25Q93038 417 aa18.06■□□□□ 0.48
AGRN-204ENST00000466223 MTG1Q9BT17 334 aaPredicted RBP18.06■□□□□ 0.48
AGRN-204ENST00000466223 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
AGRN-204ENST00000466223 NOL7Q9UMY1 257 aaKnown RBP18.06■□□□□ 0.48
AGRN-204ENST00000466223 SP4Q02446 784 aa18.05■□□□□ 0.48
AGRN-204ENST00000466223 HSDL1Q3SXM5 330 aa18.05■□□□□ 0.48
AGRN-204ENST00000466223 EARS2Q5JPH6 523 aaKnown RBP18.05■□□□□ 0.48
AGRN-204ENST00000466223 NOSTRINQ8IVI9 506 aa18.05■□□□□ 0.48
AGRN-204ENST00000466223 JPH1Q9HDC5 661 aaPredicted RBP18.05■□□□□ 0.48
AGRN-204ENST00000466223 SLC9A2Q9UBY0 812 aa18.05■□□□□ 0.48
AGRN-204ENST00000466223 DOCK5Q9H7D0 1870 aa18.04■□□□□ 0.48
AGRN-204ENST00000466223 BAG4O95429 457 aaKnown RBP18.04■□□□□ 0.48
AGRN-204ENST00000466223 TDP2O95551 362 aa18.04■□□□□ 0.48
AGRN-204ENST00000466223 ATP2B1P20020 1258 aa18.04■□□□□ 0.48
AGRN-204ENST00000466223 ATN1P54259 1190 aaPredicted RBP18.04■□□□□ 0.48
AGRN-204ENST00000466223 SLC39A5Q6ZMH5 540 aa18.04■□□□□ 0.48
AGRN-204ENST00000466223 SEPT1Q8WYJ6 367 aa18.04■□□□□ 0.48
AGRN-204ENST00000466223 DPF3Q92784 378 aa18.04■□□□□ 0.48
AGRN-204ENST00000466223 KATNAL1Q9BW62 490 aa18.04■□□□□ 0.48
AGRN-204ENST00000466223 SEZ6LQ9BYH1 1024 aa18.04■□□□□ 0.48
AGRN-204ENST00000466223 A0A0U1RQG5 324 aaPredicted RBP18.03■□□□□ 0.48
AGRN-204ENST00000466223 FAM205CA6NFA0 338 aa18.03■□□□□ 0.48
AGRN-204ENST00000466223 TNRC18O15417 2968 aaPredicted RBP18.03■□□□□ 0.48
AGRN-204ENST00000466223 U2AF2P26368 475 aaKnown RBP eCLIP18.03■□□□□ 0.48
AGRN-204ENST00000466223 PURAQ00577 322 aaKnown RBP18.03■□□□□ 0.48
AGRN-204ENST00000466223 MBOAT7Q96N66 472 aa18.03■□□□□ 0.48
AGRN-204ENST00000466223 RIT2Q99578 217 aa18.03■□□□□ 0.48
AGRN-204ENST00000466223 GPR20Q99678 358 aa18.03■□□□□ 0.48
AGRN-204ENST00000466223 BCAS3Q9H6U6 928 aa18.03■□□□□ 0.48
AGRN-204ENST00000466223 VPS37CA5D8V6 355 aaPredicted RBP18.02■□□□□ 0.48
AGRN-204ENST00000466223 DDX39AO00148 427 aaKnown RBP18.02■□□□□ 0.48
AGRN-204ENST00000466223 MSH4O15457 936 aa18.02■□□□□ 0.48
AGRN-204ENST00000466223 EDIL3O43854 480 aa18.02■□□□□ 0.48
AGRN-204ENST00000466223 GAS7O60861 476 aa18.02■□□□□ 0.48
AGRN-204ENST00000466223 PDIA4P13667 645 aaKnown RBP18.02■□□□□ 0.48
AGRN-204ENST00000466223 TRAPPC10P48553 1259 aa18.02■□□□□ 0.48
AGRN-204ENST00000466223 CHMP4BP1P59074 171 aa18.02■□□□□ 0.48
AGRN-204ENST00000466223 ITGB3BPQ13352 177 aaPredicted RBP18.02■□□□□ 0.48
AGRN-204ENST00000466223 LENG9Q96B70 501 aa18.02■□□□□ 0.48
AGRN-204ENST00000466223 UIMC1Q96RL1 719 aa18.02■□□□□ 0.48
AGRN-204ENST00000466223 TEKT3Q9BXF9 490 aa18.02■□□□□ 0.48
AGRN-204ENST00000466223 MROH7Q68CQ1 1323 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 EVI5O60447 810 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 SYT1P21579 422 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 TCF7P36402 384 aaPredicted RBP18.01■□□□□ 0.47
AGRN-204ENST00000466223 KRT76Q01546 638 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 ITGA7Q13683 1181 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 UTP14CQ5TAP6 766 aaKnown RBP18.01■□□□□ 0.47
AGRN-204ENST00000466223 C1orf53Q5VUE5 145 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 LRCH2Q5VUJ6 765 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 SLFN12Q8IYM2 578 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 SPRYD3Q8NCJ5 442 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 SLC5A5Q92911 643 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 FAM20AQ96MK3 541 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 AZI2Q9H6S1 392 aa18.01■□□□□ 0.47
AGRN-204ENST00000466223 ZNF215Q9UL58 517 aaPredicted RBP18.01■□□□□ 0.47
AGRN-204ENST00000466223 KIF28PB7ZC32 967 aa18■□□□□ 0.47
AGRN-204ENST00000466223 ARVCFO00192 962 aa18■□□□□ 0.47
AGRN-204ENST00000466223 TBX3O15119 743 aa18■□□□□ 0.47
AGRN-204ENST00000466223 SLC37A4O43826 429 aa18■□□□□ 0.47
AGRN-204ENST00000466223 HOXD8P13378 290 aaPredicted RBP18■□□□□ 0.47
AGRN-204ENST00000466223 ACTR2P61160 394 aa18■□□□□ 0.47
AGRN-204ENST00000466223 ORC2Q13416 577 aaPredicted RBP18■□□□□ 0.47
AGRN-204ENST00000466223 LRRC26Q2I0M4 334 aa18■□□□□ 0.47
AGRN-204ENST00000466223 ZNF746Q6NUN9 644 aaPredicted RBP18■□□□□ 0.47
AGRN-204ENST00000466223 GLG1Q92896 1179 aa18■□□□□ 0.47
AGRN-204ENST00000466223 ATP11BQ9Y2G3 1177 aa18■□□□□ 0.47
AGRN-204ENST00000466223 SAMM50Q9Y512 469 aa18■□□□□ 0.47
AGRN-204ENST00000466223 NR2E3Q9Y5X4 410 aa18■□□□□ 0.47
AGRN-204ENST00000466223 GSTTP1A0A1W2PQM5 241 aa17.99■□□□□ 0.47
AGRN-204ENST00000466223 DCDC2CA8MYV0 355 aa17.99■□□□□ 0.47
AGRN-204ENST00000466223 H3BRB1 525 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms