RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
SLX4-202ENST00000466154 KLRC3Q07444 240 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 PPP4R3AQ6IN85 833 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 CCDC84Q86UT8 332 aaPredicted RBP18.09■□□□□ 0.49
SLX4-202ENST00000466154 DNAJC19Q96DA6 116 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 BCAS3Q9H6U6 928 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 FAN1Q9Y2M0 1017 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 APBA3O96018 575 aa18.08■□□□□ 0.49
SLX4-202ENST00000466154 GH2P01242 217 aa18.08■□□□□ 0.49
SLX4-202ENST00000466154 CHRNA5P30532 468 aa18.08■□□□□ 0.49
SLX4-202ENST00000466154 SLC7A5Q01650 507 aa18.08■□□□□ 0.49
SLX4-202ENST00000466154 LRRC63Q05C16 580 aa18.08■□□□□ 0.49
SLX4-202ENST00000466154 DCAF17Q5H9S7 520 aaPredicted RBP18.08■□□□□ 0.49
SLX4-202ENST00000466154 SLC27A3Q5K4L6 730 aa18.08■□□□□ 0.49
SLX4-202ENST00000466154 COG1Q8WTW3 980 aa18.08■□□□□ 0.49
SLX4-202ENST00000466154 EIF3JO75822 258 aaKnown RBP18.08■□□□□ 0.48
SLX4-202ENST00000466154 ADAM9Q13443 819 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 AOC3Q16853 763 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 TMEM119Q4V9L6 283 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 LRRC55Q6ZSA7 311 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 MSANTD4Q8NCY6 345 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 LRRC27Q9C0I9 530 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 EMILIN3Q9NT22 766 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 PLAGL2Q9UPG8 496 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 ATP8B1O43520 1251 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 ARHGAP4P98171 946 aa18.08■□□□□ 0.48
SLX4-202ENST00000466154 KCTD19Q17RG1 926 aaPredicted RBP18.08■□□□□ 0.48
SLX4-202ENST00000466154 CLRN2A0PK11 232 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 LRRIQ3A6PVS8 624 aaPredicted RBP18.07■□□□□ 0.48
SLX4-202ENST00000466154 ABCB5Q2M3G0 1257 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 NLGN1Q8N2Q7 840 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 PI4KBQ9UBF8 816 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 ADAM21Q9UKJ8 722 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 L1RE1Q9UN81 338 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 NHSQ6T4R5 1651 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 TCP10L2B9ZVM9 353 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 ECE2O60344 883 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 EZH2Q15910 746 aaKnown RBP18.07■□□□□ 0.48
SLX4-202ENST00000466154 FAM133AQ8N9E0 248 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 NT5C3AQ9H0P0 336 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.07■□□□□ 0.48
SLX4-202ENST00000466154 FAM198AQ9UFP1 575 aa18.07■□□□□ 0.48
SLX4-202ENST00000466154 SCAF8Q9UPN6 1271 aaKnown RBP18.07■□□□□ 0.48
SLX4-202ENST00000466154 PRPF6O94906 941 aaKnown RBP18.06■□□□□ 0.48
SLX4-202ENST00000466154 CFBP00751 764 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 NOVP48745 357 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 CLK2P49760 499 aaKnown RBP18.06■□□□□ 0.48
SLX4-202ENST00000466154 CASP5P51878 434 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 CCDC174Q6PII3 467 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 RIN2Q8WYP3 895 aaPredicted RBP18.06■□□□□ 0.48
SLX4-202ENST00000466154 P2RX7Q99572 595 aaKnown RBP18.06■□□□□ 0.48
SLX4-202ENST00000466154 GBP3Q9H0R5 595 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 TAF1LQ8IZX4 1826 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 ACTN1P12814 892 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 SH3BP5LQ7L8J4 393 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 FBXO11Q86XK2 927 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 RAB21Q9UL25 225 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 CCDC66A2RUB6 948 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 CYP11B2P19099 503 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 NR2F2P24468 414 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 CYP2C19P33261 490 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 PDE6BP35913 854 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 CKAP4Q07065 602 aaKnown RBP18.06■□□□□ 0.48
SLX4-202ENST00000466154 KCNMA1Q12791 1236 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 HHIPL2Q6UWX4 724 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 PIGOQ8TEQ8 1089 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 CCDC17Q96LX7 622 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 ALS2CR12Q96Q35 445 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 RGL1Q9NZL6 768 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.06■□□□□ 0.48
SLX4-202ENST00000466154 SALL4Q9UJQ4 1053 aa18.06■□□□□ 0.48
SLX4-202ENST00000466154 PACSIN2Q9UNF0 486 aaPredicted RBP18.06■□□□□ 0.48
SLX4-202ENST00000466154 RSPH10B2B2RC85 870 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 CLIC2O15247 247 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 NDUFB10O96000 172 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 RSPH10BP0C881 870 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 USP14P54578 494 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 ORC2Q13416 577 aaPredicted RBP18.05■□□□□ 0.48
SLX4-202ENST00000466154 FAM83BQ5T0W9 1011 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 CATSPER3Q86XQ3 398 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 MASTLQ96GX5 879 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 PKD2L1Q9P0L9 805 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 FTCDO95954 541 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 SFMBT2Q5VUG0 894 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 SCFD1Q8WVM8 642 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 TBC1D5Q92609 795 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 MS4A14Q96JA4 679 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 CSRNP1Q96S65 589 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 AMNQ9BXJ7 453 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 BHMT2Q9H2M3 363 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 IKZF4Q9H2S9 585 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 ADAMTS1Q9UHI8 967 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 KDM3AQ9Y4C1 1321 aa18.05■□□□□ 0.48
SLX4-202ENST00000466154 CDK5RAP2Q96SN8 1893 aa18.04■□□□□ 0.48
SLX4-202ENST00000466154 ZNF831Q5JPB2 1677 aa18.04■□□□□ 0.48
SLX4-202ENST00000466154 GCFC2P16383 781 aaKnown RBP18.04■□□□□ 0.48
SLX4-202ENST00000466154 PAPD7Q5XG87 772 aaKnown RBP18.04■□□□□ 0.48
SLX4-202ENST00000466154 PPP1R18Q6NYC8 613 aa18.04■□□□□ 0.48
SLX4-202ENST00000466154 SFR1Q86XK3 245 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms