RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 GLT8D2Q9H1C3 349 aa13.76□□□□□ -0.21
TMCO3-205ENST00000465556 NCOA5Q9HCD5 579 aaKnown RBP13.76□□□□□ -0.21
TMCO3-205ENST00000465556 HDAC6Q9UBN7 1215 aa13.76□□□□□ -0.21
TMCO3-205ENST00000465556 UBIAD1Q9Y5Z9 338 aa13.76□□□□□ -0.21
TMCO3-205ENST00000465556 PRPF3O43395 683 aaKnown RBP13.75□□□□□ -0.21
TMCO3-205ENST00000465556 FOSP01100 380 aaPredicted RBP13.75□□□□□ -0.21
TMCO3-205ENST00000465556 KCNA2P16389 499 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 IFNAR1P17181 557 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 CLK2P49760 499 aaKnown RBP13.75□□□□□ -0.21
TMCO3-205ENST00000465556 CCT2P78371 535 aaKnown RBP13.75□□□□□ -0.21
TMCO3-205ENST00000465556 SMAD3P84022 425 aaKnown RBP13.75□□□□□ -0.21
TMCO3-205ENST00000465556 MTMR1Q13613 665 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 PKN1Q16512 942 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 PTGISQ16647 500 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 ZNF365Q70YC5 407 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 DEFB123Q8N688 67 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 C7orf31Q8N865 590 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 CCDC12Q8WUD4 166 aaPredicted RBP13.75□□□□□ -0.21
TMCO3-205ENST00000465556 GPR20Q99678 358 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 C16orf70Q9BSU1 422 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
TMCO3-205ENST00000465556 PPFIA3O75145 1194 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 SREBF1P36956 1147 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 ANAPC15P60006 121 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 AKAP17AQ02040 695 aaKnown RBP13.74□□□□□ -0.21
TMCO3-205ENST00000465556 SP4Q02446 784 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 BFSP2Q13515 415 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 CCDC155Q8N6L0 562 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 GIMAP8Q8ND71 665 aaPredicted RBP13.74□□□□□ -0.21
TMCO3-205ENST00000465556 CAGE1Q8TC20 777 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 DHX38Q92620 1227 aaKnown RBP13.74□□□□□ -0.21
TMCO3-205ENST00000465556 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 JADE2Q9NQC1 790 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 PDRG1Q9NUG6 133 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 TMEM260Q9NX78 707 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 PKD2L1Q9P0L9 805 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 CHD9Q3L8U1 2897 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 EVPLQ92817 2033 aa13.74□□□□□ -0.21
TMCO3-205ENST00000465556 H3BRB1 525 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 ATP9AO75110 1047 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 PFKMP08237 780 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 RFC2P35250 354 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 RBL2Q08999 1139 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 ZNF697Q5TEC3 545 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 FAM109BQ6ICB4 259 aaPredicted RBP13.73□□□□□ -0.21
TMCO3-205ENST00000465556 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
TMCO3-205ENST00000465556 CCDC148Q8NFR7 591 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 HERVK_113Q902F9 699 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 ZNF274Q96GC6 653 aaPredicted RBP13.73□□□□□ -0.21
TMCO3-205ENST00000465556 MXRA8Q9BRK3 442 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 MTIF3Q9H2K0 278 aaKnown RBP13.73□□□□□ -0.21
TMCO3-205ENST00000465556 TUT1Q9H6E5 874 aaKnown RBP13.73□□□□□ -0.21
TMCO3-205ENST00000465556 ZNF215Q9UL58 517 aaPredicted RBP13.73□□□□□ -0.21
TMCO3-205ENST00000465556 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 CHD7Q9P2D1 2997 aa13.73□□□□□ -0.21
TMCO3-205ENST00000465556 ADAMTS3O15072 1205 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 SMIM10L2AP0DMW4 78 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 SMIM10L2BP0DMW5 78 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 HOXC8P31273 242 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 ARHGAP4P98171 946 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 HIC1Q14526 733 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 JAKMIP3Q5VZ66 844 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 TRIM22Q8IYM9 498 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 RPUSD2Q8IZ73 545 aaKnown RBP13.72□□□□□ -0.21
TMCO3-205ENST00000465556 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 LARP6Q9BRS8 491 aaKnown RBP13.72□□□□□ -0.21
TMCO3-205ENST00000465556 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 KCNH7Q9NS40 1196 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 MTMR10Q9NXD2 777 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 CXXC1Q9P0U4 656 aaPredicted RBP13.72□□□□□ -0.21
TMCO3-205ENST00000465556 VPS54Q9P1Q0 977 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 EYSQ5T1H1 3165 aa13.72□□□□□ -0.21
TMCO3-205ENST00000465556 CPLX1O14810 134 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 MAFGO15525 162 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
TMCO3-205ENST00000465556 FGBP02675 491 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 DNAJB2P25686 324 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 GNA11P29992 359 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
TMCO3-205ENST00000465556 ZNF200P98182 395 aaPredicted RBP13.71□□□□□ -0.21
TMCO3-205ENST00000465556 STK3Q13188 491 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 PTK7Q13308 1070 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 UTP14CQ5TAP6 766 aaKnown RBP13.71□□□□□ -0.21
TMCO3-205ENST00000465556 MCTP2Q6DN12 878 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 LRRC8DQ7L1W4 858 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 DEFB128Q7Z7B8 93 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 CYP2W1Q8TAV3 490 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 RASGRP4Q8TDF6 673 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 CRYGNQ8WXF5 182 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 WNT8BQ93098 351 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 IL17RAQ96F46 866 aa13.71□□□□□ -0.21
TMCO3-205ENST00000465556 JPH1Q9HDC5 661 aaPredicted RBP13.71□□□□□ -0.21
TMCO3-205ENST00000465556 NFASCO94856 1347 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms