RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 CCDC42Q96M95 316 aa7.13□□□□□ -1.27
SIK3-207ENST00000465421 ALS2CR12Q96Q35 445 aa7.13□□□□□ -1.27
SIK3-207ENST00000465421 CORO1CQ9ULV4 474 aaPredicted RBP7.13□□□□□ -1.27
SIK3-207ENST00000465421 COL1A1P02452 1464 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 UBR3Q6ZT12 1888 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 CCT8L1PA6NM43 557 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 GCOM1H8Y6P7 765 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 NKRFO15226 690 aaKnown RBP eCLIP7.12□□□□□ -1.27
SIK3-207ENST00000465421 MYZAPP0CAP1 466 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 MYO1EQ12965 1108 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 ZNF268Q14587 947 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 SPA17Q15506 151 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 CCHCR1Q8TD31 782 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 THOC1Q96FV9 657 aaKnown RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 SPAG5Q96R06 1193 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.12□□□□□ -1.27
SIK3-207ENST00000465421 ISCUQ9H1K1 167 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 EPB41L4AQ9HCS5 686 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 PIH1D3Q9NQM4 214 aaKnown RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 CCDC87Q9NVE4 849 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 SLC5A4Q9NY91 659 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 CNTNAP4Q9C0A0 1308 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 NAV1Q8NEY1 1877 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 A6NHS1 94 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 BUB1BO60566 1050 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 TRIM37O94972 964 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 FUT2Q10981 343 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 PTGDRQ13258 359 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 SLMAPQ14BN4 828 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 PTPROQ16827 1216 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 GKAP1Q5VSY0 366 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 AP1ARQ63HQ0 302 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 MSL1Q68DK7 614 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 MAATS1Q7Z4T9 603 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 ANKRD13CQ8N6S4 541 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 MARCH10Q8NA82 808 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 OR2W6PQ8NHA6 318 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 NOC3LQ8WTT2 800 aaKnown RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 CNKSR1Q969H4 720 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 CENPTQ96BT3 561 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 SAAL1Q96ER3 474 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 INPP4AQ96PE3 977 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 ZNF317Q96PQ6 595 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 PYM1Q9BRP8 204 aaKnown RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 RNF26Q9BY78 433 aaPredicted RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 TSKSQ9UJT2 592 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 BAZ2BQ9UIF8 2168 aaKnown RBP7.12□□□□□ -1.27
SIK3-207ENST00000465421 NRXN2Q9P2S2 1712 aa7.12□□□□□ -1.27
SIK3-207ENST00000465421 ERICH2A1L162 156 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 PHF20L1A8MW92 1017 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 DCDC2CA8MYV0 355 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 RAD51CO43502 376 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 PECAM1P16284 738 aaPredicted RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 KRT2P35908 639 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 RWDD2BP57060 319 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 ERMARDQ5T6L9 678 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 CAPRIN2Q6IMN6 1127 aaKnown RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 HIBCHQ6NVY1 386 aaPredicted RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 RNF10Q8N5U6 811 aaKnown RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 FANCBQ8NB91 859 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 GIMAP8Q8ND71 665 aaPredicted RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 STRBPQ96SI9 672 aaKnown RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 QTRT2Q9H974 415 aaKnown RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 MINDY4BA8MYZ0 360 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 RBAK-RBAKDNI3L0D1 243 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 BACH1O14867 736 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 EPHB6O15197 1021 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 RHOBTB3O94955 611 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 SNUPNO95149 360 aaKnown RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 EIF4A3P38919 411 aaKnown RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 CCNG1P51959 295 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 ERVK-9P63128 1117 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 FAM98CQ17RN3 349 aaKnown RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 NAALADL2Q58DX5 795 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 TYW1BQ6NUM6 668 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 CLEC4GQ6UXB4 293 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 PIGWQ7Z7B1 504 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 DZIP3Q86Y13 1208 aaKnown RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 AGAP11Q8TF27 550 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 IQCDQ96DY2 449 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 KRT12Q99456 494 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 LRRC4CQ9HCJ2 640 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 BAIAP2L1Q9UHR4 511 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 SIK3Q9Y2K2 1263 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 L3MBTL1Q9Y468 752 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 TAF1P21675 1872 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 ZNF646O15015 1829 aaPredicted RBP7.11□□□□□ -1.27
SIK3-207ENST00000465421 IRS2Q9Y4H2 1338 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 FESP07332 822 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 LINGO3P0C6S8 592 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 RAB27AP51159 221 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 BLMHQ13867 455 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 SLC10A5Q5PT55 438 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 TTC38Q5R3I4 469 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 CHADLQ6NUI6 762 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 MIGA1Q8NAN2 632 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 TCP11Q8WWU5 503 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 TLCD1Q96CP7 247 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 NEUROG2Q9H2A3 272 aa7.11□□□□□ -1.27
SIK3-207ENST00000465421 PANK4Q9NVE7 773 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms