RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 PLCG1P19174 1290 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 TECP42680 631 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 TXKP42681 527 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 STX17P56962 302 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 TFF2Q03403 129 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L24Q0WX57 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 ORC2Q13416 577 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-205ENST00000465408 RASA3Q14644 834 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 NAALADL2Q58DX5 795 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 NBPF12Q5TAG4 269 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-205ENST00000465408 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L6PQ6QN14 398 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 TMC6Q7Z403 805 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 FILIP1Q7Z7B0 1213 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 FBXO11Q86XK2 927 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 UIMC1Q96RL1 719 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 MED15Q96RN5 788 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 CCSER1Q9C0I3 900 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 PRR12Q9ULL5 1215 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 TMX2Q9Y320 296 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 PRR33A8MZF0 331 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 PPP1R3GB7ZBB8 358 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 FLT3LGP49771 235 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 CCDC174Q6PII3 467 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-205ENST00000465408 BTNL9Q6UXG8 535 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 ENOX1Q8TC92 643 aaKnown RBP9.32□□□□□ -0.92
UBE4B-205ENST00000465408 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 CACTINQ8WUQ7 758 aaKnown RBP9.32□□□□□ -0.92
UBE4B-205ENST00000465408 GJA10Q969M2 543 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 AK8Q96MA6 479 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 MTMR9Q96QG7 549 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 AMNQ9BXJ7 453 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 ANO3Q9BYT9 981 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 GOPCQ9HD26 462 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 ZCCHC17Q9NP64 241 aaKnown RBP9.32□□□□□ -0.92
UBE4B-205ENST00000465408 CXXC1Q9P0U4 656 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-205ENST00000465408 DDX25Q9UHL0 483 aaKnown RBP9.32□□□□□ -0.92
UBE4B-205ENST00000465408 CTNND2Q9UQB3 1225 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 NFE2L3Q9Y4A8 694 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 LTBP2Q14767 1821 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 ATRXP46100 2492 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 MYH4Q9Y623 1939 aa9.32□□□□□ -0.92
UBE4B-205ENST00000465408 SYNRGQ9UMZ2 1314 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 CHD9Q3L8U1 2897 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 CBFA2T2O43439 604 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 MARCH6O60337 910 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 TBC1D12O60347 775 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 SERPINC1P01008 464 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 COL6A1P12109 1028 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 CAP2P40123 477 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
UBE4B-205ENST00000465408 FCGRTP55899 365 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 GRB10Q13322 594 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 DHX8Q14562 1220 aaKnown RBP9.31□□□□□ -0.92
UBE4B-205ENST00000465408 PTPN21Q16825 1174 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 TMEM266Q2M3C6 531 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.31□□□□□ -0.92
UBE4B-205ENST00000465408 KIFC2Q96AC6 838 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 TEPSINQ96N21 525 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 PNMA5Q96PV4 448 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 GSDMAQ96QA5 445 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 MMTAG2Q9BU76 263 aaKnown RBP9.31□□□□□ -0.92
UBE4B-205ENST00000465408 GLT8D2Q9H1C3 349 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 VCPKMTQ9H867 229 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 SAMSN1Q9NSI8 373 aaKnown RBP9.31□□□□□ -0.92
UBE4B-205ENST00000465408 LRWD1Q9UFC0 647 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 SYNPO2Q9UMS6 1093 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 GDAQ9Y2T3 454 aa9.31□□□□□ -0.92
UBE4B-205ENST00000465408 MGAMO43451 1857 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 POTEMA6NI47 508 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 MEIS2O14770 477 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 KLRC4O43908 158 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 OFD1O75665 1012 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 ERCC5P28715 1186 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-205ENST00000465408 HOXA13P31271 388 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-205ENST00000465408 STAT2P52630 851 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 UBASH3AP57075 661 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 NOLC1Q14978 699 aaKnown RBP eCLIP9.3□□□□□ -0.92
UBE4B-205ENST00000465408 SUPT20HL1Q3ZLR7 823 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 PPP4R3AQ6IN85 833 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 IGSF22Q8N9C0 903 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 KIAA1524Q8TCG1 905 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 SNX29Q8TEQ0 813 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 HAS1Q92839 578 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 CALML4Q96GE6 196 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 NAP1L5Q96NT1 182 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-205ENST00000465408 GAS2L1Q99501 681 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-205ENST00000465408 FEZ1Q99689 392 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 ZNF341Q9BYN7 854 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 ZNF576Q9H609 170 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 FBXO28Q9NVF7 368 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 INTS13Q9NVM9 706 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 RMND1Q9NWS8 449 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 OGDHLQ9ULD0 1010 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 MAPK8IP1Q9UQF2 711 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 CFAP47Q6ZTR5 3102 aa9.3□□□□□ -0.92
UBE4B-205ENST00000465408 PHF20L1A8MW92 1017 aa9.29□□□□□ -0.92
UBE4B-205ENST00000465408 PI4K2BG5E9Z4 385 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms