RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 METTL7BQ6UX53 244 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 HEATR3Q7Z4Q2 680 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 SPRED2Q7Z698 418 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 KCNB2Q92953 911 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 COL25A1Q9BXS0 654 aaPredicted RBP17.15■□□□□ 0.34
MRPL55-225ENST00000465268 PCDHA11Q9Y5I1 949 aa17.15■□□□□ 0.34
MRPL55-225ENST00000465268 H3BRB1 525 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 STAM2O75886 525 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 SMIM10L2AP0DMW4 78 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 SMIM10L2BP0DMW5 78 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 HOXC8P31273 242 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 PGBD1Q96JS3 809 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 TUT1Q9H6E5 874 aaKnown RBP17.14■□□□□ 0.33
MRPL55-225ENST00000465268 SLC28A3Q9HAS3 691 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 PCDHA6Q9UN73 950 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
MRPL55-225ENST00000465268 MYH6P13533 1939 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 KIAA1217Q5T5P2 1943 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 SCN5AQ14524 2016 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 EPOPA6NHQ4 379 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 RFXAPO00287 272 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 ADAMTS3O15072 1205 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 TREHO43280 583 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 CXCL10P02778 98 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 CA3P07451 260 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 ACTN1P12814 892 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 KCNA2P16389 499 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 DEFB103AP81534 67 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 NEDD9Q14511 834 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 RTN1Q16799 776 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 UTP14CQ5TAP6 766 aaKnown RBP17.13■□□□□ 0.33
MRPL55-225ENST00000465268 PPP2R2DQ66LE6 453 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 SERINC5Q86VE9 423 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 CCDC155Q8N6L0 562 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 PPM1EQ8WY54 764 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 RNPEPQ9H4A4 650 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 CERS4Q9HA82 394 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 UBIAD1Q9Y5Z9 338 aa17.13■□□□□ 0.33
MRPL55-225ENST00000465268 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-225ENST00000465268 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 C17orf102A2RUQ5 167 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 NOP56O00567 594 aaKnown RBP17.12■□□□□ 0.33
MRPL55-225ENST00000465268 ZBTB43O43298 467 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 WDR5P61964 334 aaKnown RBP17.12■□□□□ 0.33
MRPL55-225ENST00000465268 XRRA1Q6P2D8 792 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 SYNE3Q6ZMZ3 975 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 HERC6Q8IVU3 1022 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 CYP2W1Q8TAV3 490 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 SENP7Q9BQF6 1050 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 SETD4Q9NVD3 440 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
MRPL55-225ENST00000465268 GSTTP1A0A1W2PQM5 241 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 LCHNA4D1U4 455 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 GOLGA8AA7E2F4 631 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 GOLGA8BA8MQT2 603 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 STXBP3O00186 592 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 HSPA4P34932 840 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 ADD1P35611 737 aaKnown RBP17.11■□□□□ 0.33
MRPL55-225ENST00000465268 APOBRQ0VD83 1088 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 NLRX1Q86UT6 975 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 PHOSPHO2Q8TCD6 241 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 ATP6V0A1Q93050 837 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 GAS2L1Q99501 681 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-225ENST00000465268 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 RBM28Q9NW13 759 aaKnown RBP17.11■□□□□ 0.33
MRPL55-225ENST00000465268 TMEM260Q9NX78 707 aa17.11■□□□□ 0.33
MRPL55-225ENST00000465268 IGFBP4P22692 258 aa17.1■□□□□ 0.33
MRPL55-225ENST00000465268 THPOP40225 353 aa17.1■□□□□ 0.33
MRPL55-225ENST00000465268 ADAM17P78536 824 aa17.1■□□□□ 0.33
MRPL55-225ENST00000465268 CCDC85BQ15834 202 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-225ENST00000465268 CNKSR3Q6P9H4 555 aa17.1■□□□□ 0.33
MRPL55-225ENST00000465268 Q6ZUG5 572 aa17.1■□□□□ 0.33
MRPL55-225ENST00000465268 TET1Q8NFU7 2136 aa17.1■□□□□ 0.33
MRPL55-225ENST00000465268 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
MRPL55-225ENST00000465268 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
MRPL55-225ENST00000465268 JADE2Q9NQC1 790 aa17.1■□□□□ 0.33
MRPL55-225ENST00000465268 SPDYE3A6NKU9 549 aa17.09■□□□□ 0.33
MRPL55-225ENST00000465268 BAIAP3O94812 1187 aa17.09■□□□□ 0.33
MRPL55-225ENST00000465268 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-225ENST00000465268 NAPAP54920 295 aa17.09■□□□□ 0.33
MRPL55-225ENST00000465268 TAP1Q03518 808 aa17.09■□□□□ 0.33
MRPL55-225ENST00000465268 KRT32Q14532 448 aa17.09■□□□□ 0.33
MRPL55-225ENST00000465268 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.09■□□□□ 0.33
MRPL55-225ENST00000465268 PCYT2Q99447 389 aa17.09■□□□□ 0.33
MRPL55-225ENST00000465268 RIC8AQ9NPQ8 531 aa17.09■□□□□ 0.33
MRPL55-225ENST00000465268 RSPH10B2B2RC85 870 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 PPFIA3O75145 1194 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 CTSHP09668 335 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 RSPH10BP0C881 870 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 ARP10275 920 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-225ENST00000465268 MTMR1Q13613 665 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 KRT40Q6A162 431 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 RUFY4Q6ZNE9 571 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 DBF4BQ8NFT6 615 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 BRF1Q92994 677 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 ZBTB10Q96DT7 871 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms