RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 NBNO60934 754 aa11.22□□□□□ -0.61
APP-213ENST00000464867 HTRA4P83105 476 aaPredicted RBP11.22□□□□□ -0.61
APP-213ENST00000464867 RALGAPA2Q2PPJ7 1873 aa11.22□□□□□ -0.61
APP-213ENST00000464867 TKFCQ3LXA3 575 aa11.22□□□□□ -0.61
APP-213ENST00000464867 TMEM63BQ5T3F8 832 aa11.22□□□□□ -0.61
APP-213ENST00000464867 PPP1R13LQ8WUF5 828 aa11.22□□□□□ -0.61
APP-213ENST00000464867 ASIC4Q96FT7 647 aa11.22□□□□□ -0.61
APP-213ENST00000464867 VPS13AQ96RL7 3174 aa11.22□□□□□ -0.61
APP-213ENST00000464867 ADD3Q9UEY8 706 aaKnown RBP11.22□□□□□ -0.61
APP-213ENST00000464867 ISY1Q9ULR0 285 aaKnown RBP11.22□□□□□ -0.61
APP-213ENST00000464867 E9PSI1 815 aa11.21□□□□□ -0.61
APP-213ENST00000464867 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
APP-213ENST00000464867 SPTLC1O15269 473 aa11.21□□□□□ -0.61
APP-213ENST00000464867 NDUFB10O96000 172 aa11.21□□□□□ -0.61
APP-213ENST00000464867 CKBP12277 381 aa11.21□□□□□ -0.61
APP-213ENST00000464867 SMCPP49901 116 aaPredicted RBP11.21□□□□□ -0.61
APP-213ENST00000464867 HYAL1Q12794 435 aa11.21□□□□□ -0.61
APP-213ENST00000464867 PUM1Q14671 1186 aaKnown RBP eCLIP11.21□□□□□ -0.61
APP-213ENST00000464867 CBX2Q14781 532 aaPredicted RBP11.21□□□□□ -0.61
APP-213ENST00000464867 GPNMBQ14956 572 aa11.21□□□□□ -0.61
APP-213ENST00000464867 TTF1Q15361 905 aaPredicted RBP11.21□□□□□ -0.61
APP-213ENST00000464867 SLC9C2Q5TAH2 1124 aa11.21□□□□□ -0.61
APP-213ENST00000464867 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.21□□□□□ -0.61
APP-213ENST00000464867 RIPOR3Q96MK2 946 aa11.21□□□□□ -0.61
APP-213ENST00000464867 TRERF1Q96PN7 1200 aa11.21□□□□□ -0.61
APP-213ENST00000464867 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
APP-213ENST00000464867 C11orf84Q9BUA3 381 aaPredicted RBP11.21□□□□□ -0.61
APP-213ENST00000464867 ATP8A2Q9NTI2 1148 aa11.21□□□□□ -0.61
APP-213ENST00000464867 EVA1BQ9NVM1 165 aa11.21□□□□□ -0.61
APP-213ENST00000464867 DMDP11532 3685 aa11.21□□□□□ -0.61
APP-213ENST00000464867 BAZ2AQ9UIF9 1905 aaKnown RBP11.21□□□□□ -0.62
APP-213ENST00000464867 CHD6Q8TD26 2715 aa11.2□□□□□ -0.62
APP-213ENST00000464867 EMSYQ7Z589 1322 aa11.2□□□□□ -0.62
APP-213ENST00000464867 CFAP99D6REC4 459 aa11.2□□□□□ -0.62
APP-213ENST00000464867 TBX10O75333 385 aa11.2□□□□□ -0.62
APP-213ENST00000464867 LGR5O75473 907 aa11.2□□□□□ -0.62
APP-213ENST00000464867 EYA4O95677 639 aa11.2□□□□□ -0.62
APP-213ENST00000464867 RB1P06400 928 aa11.2□□□□□ -0.62
APP-213ENST00000464867 ICAM3P32942 547 aa11.2□□□□□ -0.62
APP-213ENST00000464867 CTNNB1P35222 781 aa11.2□□□□□ -0.62
APP-213ENST00000464867 PPP2R5BQ15173 497 aa11.2□□□□□ -0.62
APP-213ENST00000464867 PTPN21Q16825 1174 aa11.2□□□□□ -0.62
APP-213ENST00000464867 C16orf86Q6ZW13 317 aa11.2□□□□□ -0.62
APP-213ENST00000464867 KCNG4Q8TDN1 519 aa11.2□□□□□ -0.62
APP-213ENST00000464867 RMDN1Q96DB5 314 aa11.2□□□□□ -0.62
APP-213ENST00000464867 RPGRIP1Q96KN7 1286 aa11.2□□□□□ -0.62
APP-213ENST00000464867 RWDD3Q9Y3V2 267 aa11.2□□□□□ -0.62
APP-213ENST00000464867 DDX49Q9Y6V7 483 aaKnown RBP11.2□□□□□ -0.62
APP-213ENST00000464867 ATRXP46100 2492 aa11.2□□□□□ -0.62
APP-213ENST00000464867 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
APP-213ENST00000464867 A6NJR5 290 aa11.19□□□□□ -0.62
APP-213ENST00000464867 UPP2O95045 317 aa11.19□□□□□ -0.62
APP-213ENST00000464867 GNAI2P04899 355 aa11.19□□□□□ -0.62
APP-213ENST00000464867 ALAS1P13196 640 aa11.19□□□□□ -0.62
APP-213ENST00000464867 SH3BP2P78314 561 aa11.19□□□□□ -0.62
APP-213ENST00000464867 RBL2Q08999 1139 aa11.19□□□□□ -0.62
APP-213ENST00000464867 IKQ13123 557 aaPredicted RBP11.19□□□□□ -0.62
APP-213ENST00000464867 ADAM15Q13444 863 aa11.19□□□□□ -0.62
APP-213ENST00000464867 CCDC184Q52MB2 194 aa11.19□□□□□ -0.62
APP-213ENST00000464867 C12orf60Q5U649 245 aa11.19□□□□□ -0.62
APP-213ENST00000464867 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
APP-213ENST00000464867 GDF6Q6KF10 455 aaPredicted RBP11.19□□□□□ -0.62
APP-213ENST00000464867 LRRC47Q8N1G4 583 aaKnown RBP11.19□□□□□ -0.62
APP-213ENST00000464867 HPS1Q92902 700 aa11.19□□□□□ -0.62
APP-213ENST00000464867 PHF7Q9BWX1 381 aaPredicted RBP11.19□□□□□ -0.62
APP-213ENST00000464867 ANTXR1Q9H6X2 564 aa11.19□□□□□ -0.62
APP-213ENST00000464867 INCENPQ9NQS7 918 aa11.19□□□□□ -0.62
APP-213ENST00000464867 NYAP2Q9P242 653 aa11.19□□□□□ -0.62
APP-213ENST00000464867 CLIP2Q9UDT6 1046 aa11.19□□□□□ -0.62
APP-213ENST00000464867 DBNLQ9UJU6 430 aaKnown RBP11.19□□□□□ -0.62
APP-213ENST00000464867 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
APP-213ENST00000464867 MYH4Q9Y623 1939 aa11.19□□□□□ -0.62
APP-213ENST00000464867 DMXL1Q9Y485 3027 aa11.18□□□□□ -0.62
APP-213ENST00000464867 LOC102724159A0A0B4J2E5 919 aa11.18□□□□□ -0.62
APP-213ENST00000464867 PDE6AP16499 860 aa11.18□□□□□ -0.62
APP-213ENST00000464867 RRP1P56182 461 aaKnown RBP11.18□□□□□ -0.62
APP-213ENST00000464867 PDE4BQ07343 736 aa11.18□□□□□ -0.62
APP-213ENST00000464867 PWP2Q15269 919 aaKnown RBP11.18□□□□□ -0.62
APP-213ENST00000464867 TCTN1Q2MV58 587 aa11.18□□□□□ -0.62
APP-213ENST00000464867 NSMFQ6X4W1 530 aa11.18□□□□□ -0.62
APP-213ENST00000464867 SESTD1Q86VW0 696 aa11.18□□□□□ -0.62
APP-213ENST00000464867 RPAP2Q8IXW5 612 aaPredicted RBP11.18□□□□□ -0.62
APP-213ENST00000464867 LCORLQ8N3X6 602 aa11.18□□□□□ -0.62
APP-213ENST00000464867 FIBCD1Q8N539 461 aa11.18□□□□□ -0.62
APP-213ENST00000464867 C7orf31Q8N865 590 aa11.18□□□□□ -0.62
APP-213ENST00000464867 MORC4Q8TE76 937 aa11.18□□□□□ -0.62
APP-213ENST00000464867 CHURC1Q8WUH1 139 aa11.18□□□□□ -0.62
APP-213ENST00000464867 CCDC8Q9H0W5 538 aaPredicted RBP11.18□□□□□ -0.62
APP-213ENST00000464867 MKNK2Q9HBH9 465 aa11.18□□□□□ -0.62
APP-213ENST00000464867 CYP39A1Q9NYL5 469 aa11.18□□□□□ -0.62
APP-213ENST00000464867 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
APP-213ENST00000464867 ZNF532Q9HCE3 1301 aa11.17□□□□□ -0.62
APP-213ENST00000464867 CYP2D7A0A087X1C5 515 aa11.17□□□□□ -0.62
APP-213ENST00000464867 PNMA6EA0A0J9YXQ4 647 aa11.17□□□□□ -0.62
APP-213ENST00000464867 RBM47A0AV96 593 aaKnown RBP11.17□□□□□ -0.62
APP-213ENST00000464867 LINC01565O15544 149 aa11.17□□□□□ -0.62
APP-213ENST00000464867 SIAH2O43255 324 aa11.17□□□□□ -0.62
APP-213ENST00000464867 SURF6O75683 361 aaKnown RBP11.17□□□□□ -0.62
APP-213ENST00000464867 BMP3P12645 472 aa11.17□□□□□ -0.62
APP-213ENST00000464867 STAT2P52630 851 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms