RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 ARIH2O95376 493 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 SNAI1O95863 264 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 HMGCRP04035 888 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 CYBAP13498 195 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 KCNA2P16389 499 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 HOXD10P28358 340 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 RGS2P41220 211 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 SETQ01105 290 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 PDE4DQ08499 809 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 SPIRE1Q08AE8 756 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 MTMR1Q13613 665 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 STXBP2Q15833 593 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 TPRNQ4KMQ1 711 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 SPECC1Q5M775 1068 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 XRRA1Q6P2D8 792 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 SHC4Q6S5L8 630 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 USP49Q70CQ1 688 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 NIPA1Q7RTP0 329 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 KCNG4Q8TDN1 519 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 DIS3LQ8TF46 1054 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 SLC5A5Q92911 643 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 GPRASP2Q96D09 838 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 NAP1L4Q99733 375 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 SCAND2PQ9GZW5 306 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 AGO4Q9HCK5 861 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 PDGFCQ9NRA1 345 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 KCNH7Q9NS40 1196 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 VAV3Q9UKW4 847 aa10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 DIS3Q9Y2L1 958 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-204ENST00000464812 SYNGAP1Q96PV0 1343 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 LOC102724159A0A0B4J2E5 919 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 VWA3AA6NCI4 1184 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 POTEMA6NI47 508 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 ASB14A6NK59 587 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 LAD1O00515 517 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 DHX15O43143 795 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 SORBS3O60504 671 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 EIF3JO75822 258 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 PSMD10O75832 226 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 BMP15O95972 392 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 GJB1P08034 283 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 UBA1P22314 1058 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 PRPHP41219 470 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 GJA8P48165 433 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 PLCB2Q00722 1185 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 SP2Q02086 613 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 PWP2Q15269 919 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 GJC2Q5T442 439 aaPredicted RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 OLFML2BQ68BL8 750 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 TAPT1Q6NXT6 567 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 B3GNT9Q6UX72 402 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 SEPT14Q6ZU15 432 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 KRI1Q8N9T8 703 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 LRRC15Q8TF66 581 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 U2AF1L4Q8WU68 220 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 LENG1Q96BZ8 264 aaPredicted RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 TINF2Q9BSI4 451 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 CSRNP2Q9H175 543 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 GOLPH3LQ9H4A5 285 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 CEP131Q9UPN4 1083 aa10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 SRPRBQ9Y5M8 271 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-204ENST00000464812 A0A087X0B3 334 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 SPATA31C2B4DYI2 1134 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 DDX39AO00148 427 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 IPO5O00410 1097 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 EML1O00423 815 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 TBX3O15119 743 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 CUTAO60888 179 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 STAM2O75886 525 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 SGPL1O95470 568 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 ZNF865P0CJ78 1059 aaPredicted RBP10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 CDC25AP30304 524 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 ICAM3P32942 547 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 TECP42680 631 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 TXKP42681 527 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 ME1P48163 572 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 ARHGEF6Q15052 776 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 NFKBIBQ15653 356 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 ARL6IP4Q66PJ3 421 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 NLRX1Q86UT6 975 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 IGSF22Q8N9C0 903 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 FERMT2Q96AC1 680 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 DEFB118Q96PH6 123 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 ZNF577Q9BSK1 485 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 RNF208Q9H0X6 261 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 UNC45AQ9H3U1 944 aa10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 TTC12Q9H892 705 aaPredicted RBP10.13□□□□□ -0.79
NUDCD3-204ENST00000464812 RBM47A0AV96 593 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-204ENST00000464812 RBAK-RBAKDNI3L0D1 243 aa10.12□□□□□ -0.79
NUDCD3-204ENST00000464812 CCNE2O96020 404 aa10.12□□□□□ -0.79
NUDCD3-204ENST00000464812 LIG1P18858 919 aa10.12□□□□□ -0.79
NUDCD3-204ENST00000464812 ADCYAP1R1P41586 468 aa10.12□□□□□ -0.79
NUDCD3-204ENST00000464812 LY6KQ17RY6 165 aa10.12□□□□□ -0.79
NUDCD3-204ENST00000464812 LRCH2Q5VUJ6 765 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms