RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 ALADP13716 330 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 HPDP32754 393 aaPredicted RBP12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 GUCY2FP51841 1108 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 INHBEP58166 350 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 TRAF1Q13077 416 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 PTGDRQ13258 359 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 QPCTQ16769 361 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 HIBCHQ6NVY1 386 aaPredicted RBP12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 MFSD6Q6ZSS7 791 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 GIMAP8Q8ND71 665 aaPredicted RBP12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 STAMQ92783 540 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 STRBPQ96SI9 672 aaKnown RBP12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 SLC12A4Q9UP95 1085 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
TNRC6A-205ENST00000464539 BHMG1C9JSJ3 638 aaPredicted RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 AKR1B10O60218 316 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 LUC7L3O95232 432 aaKnown RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 ANP32DO95626 131 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CCND1P24385 295 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CCNE1P24864 410 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 ADORA1P30542 326 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 HSD17B3P37058 310 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 SCARF1Q14162 830 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 PPP1R7Q15435 360 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 ZNF174Q15697 407 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CCDC57Q2TAC2 916 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 ODF2Q5BJF6 829 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CCDC84Q86UT8 332 aaPredicted RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 TNFRSF25Q93038 417 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CHMP6Q96FZ7 201 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 ARHGAP20Q9P2F6 1191 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 NARFQ9UHQ1 456 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 DICER1Q9UPY3 1922 aaKnown RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 RTL9Q8NET4 1388 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 ABCB11O95342 1321 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 RBAK-RBAKDNI3L0D1 243 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 SMNDC1O75940 238 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 SNUPNO95149 360 aaKnown RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 PECAM1P16284 738 aaPredicted RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CXCR5P32302 372 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 EIF4A3P38919 411 aaKnown RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 EIF3BP55884 814 aaKnown RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 DEFB115Q30KQ5 88 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 COBLL1Q53SF7 1204 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 MIS18BP1Q6P0N0 1132 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 IFNL3Q8IZI9 196 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CSGALNACT2Q8N6G5 542 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 TEX9Q8N6V9 391 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 CNKSR1Q969H4 720 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 UBAC1Q9BSL1 405 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 NAPBQ9H115 298 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 NUCKS1Q9H1E3 243 aaKnown RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 RNF41Q9H4P4 317 aaPredicted RBP12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 MAGEF1Q9HAY2 307 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 TMEM59LQ9UK28 342 aa12.65□□□□□ -0.38
TNRC6A-205ENST00000464539 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 AHCYL1O43865 530 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 ITGBL1O95965 494 aaPredicted RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 CTNNA1P35221 906 aaKnown RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 STAT6P42226 847 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 MTIF2P46199 727 aaKnown RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 CCNG1P51959 295 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 MRPS25P82663 173 aaKnown RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 ZNF844Q08AG5 666 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 SEPT2Q15019 361 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 SPRED3Q2MJR0 410 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 ACCSLQ4AC99 568 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 CCDC38Q502W7 563 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 ERMARDQ5T6L9 678 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 NBPF10Q6P3W6 841 aaKnown RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 KRT26Q7Z3Y9 468 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 ZNF654Q8IZM8 581 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 MICAL1Q8TDZ2 1067 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 P2RX5Q93086 422 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 KRT12Q99456 494 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 NDST4Q9H3R1 872 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 CUEDC2Q9H467 287 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 KIF9Q9HAQ2 790 aa12.64□□□□□ -0.39
TNRC6A-205ENST00000464539 FRMD3A2A2Y4 597 aa12.63□□□□□ -0.39
TNRC6A-205ENST00000464539 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
TNRC6A-205ENST00000464539 GNAT2P19087 354 aa12.63□□□□□ -0.39
TNRC6A-205ENST00000464539 IBSPP21815 317 aaPredicted RBP12.63□□□□□ -0.39
TNRC6A-205ENST00000464539 PMS1P54277 932 aaKnown RBP12.63□□□□□ -0.39
TNRC6A-205ENST00000464539 MYO1EQ12965 1108 aa12.63□□□□□ -0.39
TNRC6A-205ENST00000464539 PKN1Q16512 942 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms