RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 DSEQ9UL01 958 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 KCTD3Q9Y597 815 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 TCRBV5S2A0A599 114 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 NPIPB6E9PJ23 425 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 RASGRP1O95267 797 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 SRGAP2CP0DJJ0 459 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 GPR19Q15760 415 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 CRY1Q16526 586 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 CIAPIN1Q6FI81 312 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 ZNF662Q6ZS27 426 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 EP400NLQ6ZTU2 488 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 KIAA0907Q7Z7F0 614 aaPredicted RBP5.94□□□□□ -1.46
CLK1-208ENST00000464454 TMEM151BQ8IW70 566 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 NLGN4XQ8N0W4 816 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 TTLL11Q8NHH1 800 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 FEZ1Q99689 392 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 CELF4Q9BZC1 486 aaKnown RBP5.94□□□□□ -1.46
CLK1-208ENST00000464454 BCAS3Q9H6U6 928 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 CATSPERZQ9NTU4 200 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 DTLQ9NZJ0 730 aa5.94□□□□□ -1.46
CLK1-208ENST00000464454 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
CLK1-208ENST00000464454 TCRBV16S1A1N1A0A5B0 115 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 CCDC66A2RUB6 948 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 ANKRD62A6NC57 917 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 PPP1R12AO14974 1030 aaPredicted RBP5.93□□□□□ -1.46
CLK1-208ENST00000464454 SLC27A2O14975 620 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 ASLP04424 464 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 CYP2C8P10632 490 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 COL6A2P12110 1019 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 NCLP19338 710 aaKnown RBP5.93□□□□□ -1.46
CLK1-208ENST00000464454 PI3P19957 117 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 IGFALSP35858 605 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 FLT3P36888 993 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 NKX3-2P78367 333 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 FOXO4P98177 505 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 CNKSR3Q6P9H4 555 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 ZSCAN18Q8TBC5 510 aaPredicted RBP5.93□□□□□ -1.46
CLK1-208ENST00000464454 TOE1Q96GM8 510 aaKnown RBP5.93□□□□□ -1.46
CLK1-208ENST00000464454 SCLYQ96I15 445 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 INTS7Q9NVH2 962 aaKnown RBP5.93□□□□□ -1.46
CLK1-208ENST00000464454 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 PLAAQ9Y263 795 aa5.93□□□□□ -1.46
CLK1-208ENST00000464454 NKRFO15226 690 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLK1-208ENST00000464454 NUAK1O60285 661 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 PYGMP11217 842 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 ATF2P15336 505 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 DNM2P50570 870 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 CAP1Q01518 475 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 PABPC4Q13310 644 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLK1-208ENST00000464454 SSPNQ14714 243 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 FIGNQ5HY92 759 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 KCTD1Q719H9 257 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 FGD2Q7Z6J4 655 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.92□□□□□ -1.46
CLK1-208ENST00000464454 DDX53Q86TM3 631 aaKnown RBP5.92□□□□□ -1.46
CLK1-208ENST00000464454 FAM129CQ86XR2 697 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 TMEFF1Q8IYR6 380 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 ARRDC4Q8NCT1 418 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 SMARCC2Q8TAQ2 1214 aa5.92□□□□□ -1.46
CLK1-208ENST00000464454 PDGFDQ9GZP0 370 aaPredicted RBP5.92□□□□□ -1.46
CLK1-208ENST00000464454 MAGEC2Q9UBF1 373 aaPredicted RBP5.92□□□□□ -1.46
CLK1-208ENST00000464454 OPA1O60313 960 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 PDE6AP16499 860 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 MC3RP41968 323 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 LIMS1P48059 325 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 EPHA5P54756 1037 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 GYS2P54840 703 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 LACTBP83111 547 aaPredicted RBP5.91□□□□□ -1.46
CLK1-208ENST00000464454 TUSC3Q13454 348 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 TKFCQ3LXA3 575 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 CD300LDQ6UXZ3 194 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 ARHGAP36Q6ZRI8 547 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 NINJ1Q92982 152 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 CLUHP3Q96NS8 147 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 TMX1Q9H3N1 280 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 HSPBP1Q9NZL4 362 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 SRPK3Q9UPE1 567 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 CD2APQ9Y5K6 639 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 PMF1-BGLAPU3KQ54 211 aa5.91□□□□□ -1.46
CLK1-208ENST00000464454 ZNF561-AS1K7EIQ3 104 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 DNAJC8O75937 253 aaPredicted RBP5.9□□□□□ -1.46
CLK1-208ENST00000464454 CKMP06732 381 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 C8BP07358 591 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 GJA4P35212 333 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 RNF187Q5TA31 235 aaPredicted RBP5.9□□□□□ -1.46
CLK1-208ENST00000464454 TCERG1LQ5VWI1 586 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 ZCCHC8Q6NZY4 707 aaKnown RBP5.9□□□□□ -1.46
CLK1-208ENST00000464454 UBE2R2Q712K3 238 aaPredicted RBP5.9□□□□□ -1.46
CLK1-208ENST00000464454 LRRC56Q8IYG6 542 aaPredicted RBP5.9□□□□□ -1.46
CLK1-208ENST00000464454 PWWP2AQ96N64 755 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 CBLCQ9ULV8 474 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 COQ6Q9Y2Z9 468 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 PRKAB1Q9Y478 270 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 ATP23Q9Y6H3 246 aa5.9□□□□□ -1.46
CLK1-208ENST00000464454 KRT15P19012 456 aa5.89□□□□□ -1.47
CLK1-208ENST00000464454 STAT5AP42229 794 aa5.89□□□□□ -1.47
CLK1-208ENST00000464454 AFF3P51826 1226 aaKnown RBP5.89□□□□□ -1.47
CLK1-208ENST00000464454 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
CLK1-208ENST00000464454 TEPPQ6URK8 271 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms