RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 BADQ92934 168 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 SNX21Q969T3 373 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 GDF15Q99988 308 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 SENP7Q9BQF6 1050 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 KCNH7Q9NS40 1196 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 GJB4Q9NTQ9 266 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 KIAA0355O15063 1070 aa19.41■□□□□ 0.7
VPS52-215ENST00000464425 B4GALT4O60513 344 aa19.41■□□□□ 0.7
VPS52-215ENST00000464425 JAK2O60674 1132 aa19.41■□□□□ 0.7
VPS52-215ENST00000464425 CD4P01730 458 aa19.41■□□□□ 0.7
VPS52-215ENST00000464425 FDPSP14324 419 aaKnown RBP19.41■□□□□ 0.7
VPS52-215ENST00000464425 RAG1P15918 1043 aa19.41■□□□□ 0.7
VPS52-215ENST00000464425 ST3GAL1Q11201 340 aa19.41■□□□□ 0.7
VPS52-215ENST00000464425 GIMAP8Q8ND71 665 aaPredicted RBP19.41■□□□□ 0.7
VPS52-215ENST00000464425 NSUN7Q8NE18 718 aaKnown RBP19.41■□□□□ 0.7
VPS52-215ENST00000464425 TMX3Q96JJ7 454 aa19.41■□□□□ 0.7
VPS52-215ENST00000464425 SEZ6LQ9BYH1 1024 aa19.41■□□□□ 0.7
VPS52-215ENST00000464425 TRMT13Q9NUP7 481 aaKnown RBP19.41■□□□□ 0.7
VPS52-215ENST00000464425 FAM86B1E9PN63 330 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 MEIS1O00470 390 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 MAFGO15525 162 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 CYP3A4P08684 503 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 FAM86B2P0C5J1 330 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 HOXD8P13378 290 aaPredicted RBP19.4■□□□□ 0.7
VPS52-215ENST00000464425 PSEN2P49810 448 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 NFRKBQ6P4R8 1299 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 CCDC83Q8IWF9 413 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 BLIDQ8IZY5 108 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 CRYGNQ8WXF5 182 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 UIMC1Q96RL1 719 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 GPR20Q99678 358 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 LLPHQ9BRT6 129 aaKnown RBP19.4■□□□□ 0.7
VPS52-215ENST00000464425 ALG1Q9BT22 464 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 UBE2OQ9C0C9 1292 aaKnown RBP19.4■□□□□ 0.7
VPS52-215ENST00000464425 PRO3102Q9H379 93 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 TBX21Q9UL17 535 aa19.4■□□□□ 0.7
VPS52-215ENST00000464425 RANBP2P49792 3224 aaKnown RBP19.39■□□□□ 0.69
VPS52-215ENST00000464425 XBP1P17861 261 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 MFSD10Q14728 455 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 NPY5RQ15761 445 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 KIAA0753Q2KHM9 967 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 UTP14CQ5TAP6 766 aaKnown RBP19.39■□□□□ 0.69
VPS52-215ENST00000464425 GALNT17Q6IS24 598 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 PLA2G4DQ86XP0 818 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 WASF1Q92558 559 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 PHF20Q9BVI0 1012 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 AGO4Q9HCK5 861 aaKnown RBP19.39■□□□□ 0.69
VPS52-215ENST00000464425 SCN10AQ9Y5Y9 1956 aa19.39■□□□□ 0.69
VPS52-215ENST00000464425 F2P00734 622 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 TIMP1P01033 207 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 LGALS2P05162 132 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 BMP8BP34820 402 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 FOSBP53539 338 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 HABP4Q5JVS0 413 aaKnown RBP19.38■□□□□ 0.69
VPS52-215ENST00000464425 C7orf31Q8N865 590 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 DAGLBQ8NCG7 672 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 C16orf70Q9BSU1 422 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 KATNAL1Q9BW62 490 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 PPP1R12CQ9BZL4 782 aa19.38■□□□□ 0.69
VPS52-215ENST00000464425 M0R2N6 131 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 EDIL3O43854 480 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 CYP2C9P11712 490 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 PRR16Q569H4 304 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 NIPA1Q7RTP0 329 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 FAM177A1Q8N128 213 aaPredicted RBP19.37■□□□□ 0.69
VPS52-215ENST00000464425 TBCKQ8TEA7 893 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 SDF4Q9BRK5 362 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 JPH1Q9HDC5 661 aaPredicted RBP19.37■□□□□ 0.69
VPS52-215ENST00000464425 HDAC6Q9UBN7 1215 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 TRIOBPQ9H2D6 2365 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 DOCK5Q9H7D0 1870 aa19.37■□□□□ 0.69
VPS52-215ENST00000464425 IGLV3-22A0A075B6J6 115 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 GSTTP1A0A1W2PQM5 241 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 H3BRB1 525 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 HAS3O00219 553 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 SUPT20HL2P0C7V6 817 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 CYP2C18P33260 490 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 PTPN11Q06124 597 aaPredicted RBP19.36■□□□□ 0.69
VPS52-215ENST00000464425 ITGB3BPQ13352 177 aaPredicted RBP19.36■□□□□ 0.69
VPS52-215ENST00000464425 GDF6Q6KF10 455 aaPredicted RBP19.36■□□□□ 0.69
VPS52-215ENST00000464425 TRIM50Q86XT4 487 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 OXER1Q8TDS5 423 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 SEPT1Q8WYJ6 367 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 HIPK3Q9H422 1215 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 TUT1Q9H6E5 874 aaKnown RBP19.36■□□□□ 0.69
VPS52-215ENST00000464425 SLC9A2Q9UBY0 812 aa19.36■□□□□ 0.69
VPS52-215ENST00000464425 UMODL1Q5DID0 1318 aa19.35■□□□□ 0.69
VPS52-215ENST00000464425 K7ELQ4 463 aaPredicted RBP19.35■□□□□ 0.69
VPS52-215ENST00000464425 DDX39AO00148 427 aaKnown RBP19.35■□□□□ 0.69
VPS52-215ENST00000464425 CIITAP33076 1130 aa19.35■□□□□ 0.69
VPS52-215ENST00000464425 TCF7P36402 384 aaPredicted RBP19.35■□□□□ 0.69
VPS52-215ENST00000464425 USP11P51784 963 aa19.35■□□□□ 0.69
VPS52-215ENST00000464425 CUL4AQ13619 759 aa19.35■□□□□ 0.69
VPS52-215ENST00000464425 PTGISQ16647 500 aa19.35■□□□□ 0.69
VPS52-215ENST00000464425 SESTD1Q86VW0 696 aa19.35■□□□□ 0.69
VPS52-215ENST00000464425 NOC4LQ9BVI4 516 aaKnown RBP19.35■□□□□ 0.69
VPS52-215ENST00000464425 NOD1Q9Y239 953 aa19.35■□□□□ 0.69
VPS52-215ENST00000464425 NFASCO94856 1347 aa19.34■□□□□ 0.69
VPS52-215ENST00000464425 IPO5O00410 1097 aaKnown RBP19.34■□□□□ 0.69
VPS52-215ENST00000464425 NONOQ15233 471 aaKnown RBP eCLIP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms