RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 BTBD19C9JJ37 291 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 CTIFO43310 598 aaKnown RBP16.24■□□□□ 0.19
COL5A1-205ENST00000464187 UBA7P41226 1012 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL5A1-205ENST00000464187 TMEM266Q2M3C6 531 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 ZNF658Q5TYW1 1059 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-205ENST00000464187 SAPCD2Q86UD0 394 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 ZNF592Q92610 1267 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 TAAR1Q96RJ0 339 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 TXNRD2Q9NNW7 524 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 A1CFQ9NQ94 594 aaKnown RBP16.24■□□□□ 0.19
COL5A1-205ENST00000464187 RBPJLQ9UBG7 517 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 RABGAP1Q9Y3P9 1069 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 RPTORQ8N122 1335 aa16.24■□□□□ 0.19
COL5A1-205ENST00000464187 IGLV3-22A0A075B6J6 115 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 PDHXO00330 501 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 CNMDO75829 334 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 CYP2C8P10632 490 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
COL5A1-205ENST00000464187 ZNF710Q8N1W2 664 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 TC2NQ8N9U0 490 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 RASSF8Q8NHQ8 419 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 ETNPPLQ8TBG4 499 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 PURBQ96QR8 312 aaKnown RBP16.23■□□□□ 0.19
COL5A1-205ENST00000464187 UIMC1Q96RL1 719 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 RMDN3Q96TC7 470 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 CYP39A1Q9NYL5 469 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 RWDD2AQ9UIY3 292 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 PCDHA12Q9UN75 941 aa16.23■□□□□ 0.19
COL5A1-205ENST00000464187 TBX3O15119 743 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 TEX33O43247 280 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 COBLO75128 1261 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
COL5A1-205ENST00000464187 ZNF157P51786 506 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-205ENST00000464187 PAK1Q13153 545 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 CEP55Q53EZ4 464 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 SLFN12Q8IYM2 578 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 ZFP91Q96JP5 570 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-205ENST00000464187 PLIN2Q99541 437 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 MOV10L1Q9BXT6 1211 aaKnown RBP16.22■□□□□ 0.19
COL5A1-205ENST00000464187 RAB34Q9BZG1 259 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
COL5A1-205ENST00000464187 GDAQ9Y2T3 454 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 SLC45A1Q9Y2W3 748 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 A0A0G2JMZ2 1700 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 POTEMA6NI47 508 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 KIF2AO00139 706 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-205ENST00000464187 PLCG1P19174 1290 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 PBX1P40424 430 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 PDIA5Q14554 519 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 Q3C1V9 767 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 ANKRD23Q86SG2 305 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 CABP7Q86V35 215 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 SMC1BQ8NDV3 1235 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 IL31RAQ8NI17 732 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-205ENST00000464187 NELFBQ8WX92 580 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 MAF1Q9H063 256 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 PXMP2Q9NR77 195 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 KBTBD4Q9NVX7 518 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 FBXO40Q9UH90 709 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 FRMPD4Q14CM0 1322 aa16.22■□□□□ 0.19
COL5A1-205ENST00000464187 MSH4O15457 936 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 KLRC4O43908 158 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 PGM5Q15124 567 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 ARHGEF16Q5VV41 709 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 PCNX4Q63HM2 1172 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 RASAL3Q86YV0 1011 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 FAM20AQ96MK3 541 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 PDCD2LQ9BRP1 358 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 LRWD1Q9UFC0 647 aa16.21■□□□□ 0.19
COL5A1-205ENST00000464187 MEIS1O00470 390 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 MYL1P05976 194 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 ERCC3P19447 782 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 PRCPP42785 496 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 ADKP55263 362 aaKnown RBP16.2■□□□□ 0.18
COL5A1-205ENST00000464187 KCNB1Q14721 858 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 RGMBQ6NW40 437 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 GTF3C2Q8WUA4 911 aaPredicted RBP16.2■□□□□ 0.18
COL5A1-205ENST00000464187 CTAGE1Q96RT6 745 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 PTPN18Q99952 460 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 MXRA8Q9BRK3 442 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 MMTAG2Q9BU76 263 aaKnown RBP16.2■□□□□ 0.18
COL5A1-205ENST00000464187 CUEDC2Q9H467 287 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 MAGEF1Q9HAY2 307 aa16.2■□□□□ 0.18
COL5A1-205ENST00000464187 ARHGAP6O43182 974 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 CCP110O43303 1012 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 SLC25A27O95847 323 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 ITGB5P18084 799 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 MRPS9P82933 396 aaKnown RBP16.19■□□□□ 0.18
COL5A1-205ENST00000464187 SETQ01105 290 aaPredicted RBP16.19■□□□□ 0.18
COL5A1-205ENST00000464187 KMT5BQ4FZB7 885 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 BAG1Q99933 345 aaPredicted RBP16.19■□□□□ 0.18
COL5A1-205ENST00000464187 LIMA1Q9UHB6 759 aaKnown RBP16.19■□□□□ 0.18
COL5A1-205ENST00000464187 TRPM7Q96QT4 1865 aa16.19■□□□□ 0.18
COL5A1-205ENST00000464187 PFASO15067 1338 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms