RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZNRF3Q9ULT6 936 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 INSRP06213 1382 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 USP54Q70EL1 1684 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 TP53P04637 393 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 CCNFP41002 786 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 CHRNEQ04844 493 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 SLC14A2Q15849 920 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 CC2D1BQ5T0F9 858 aaKnown RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 CRTC3Q6UUV7 619 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 C1QL4Q86Z23 238 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 BHLHE22Q8NFJ8 381 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 MAP6Q96JE9 813 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 PLCD4Q9BRC7 762 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 TMOD3Q9NYL9 352 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 DDX41Q9UJV9 622 aaKnown RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 PCDHB12Q9Y5F1 795 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 KDM6AO15550 1401 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 WDR90Q96KV7 1748 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 C4BP0C0L5 1744 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 CHRNA5P30532 468 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 RFC4P35249 363 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 CTCFP49711 727 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-204ENST00000463622 DDR1Q08345 913 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 ADGRF1Q5T601 910 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 DCAF15Q66K64 600 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 LCNL1Q6ZST4 164 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 PPFIBP1Q86W92 1011 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 CCDC144CPQ8IYA2 1237 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 CDADC1Q9BWV3 514 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 SLC6A17Q9H1V8 727 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 CWC22Q9HCG8 908 aaKnown RBP4.84□□□□□ -1.63
SCFD1-204ENST00000463622 SUCOQ9UBS9 1254 aaKnown RBP4.84□□□□□ -1.63
SCFD1-204ENST00000463622 SMG5Q9UPR3 1016 aaKnown RBP4.84□□□□□ -1.63
SCFD1-204ENST00000463622 FAM208AQ9UK61 1670 aaKnown RBP4.84□□□□□ -1.63
SCFD1-204ENST00000463622 KIF24Q5T7B8 1368 aa4.84□□□□□ -1.63
SCFD1-204ENST00000463622 ERVV-2B6SEH9 535 aa4.84□□□□□ -1.64
SCFD1-204ENST00000463622 SHOXO15266 292 aa4.84□□□□□ -1.64
SCFD1-204ENST00000463622 PHKG2P15735 406 aa4.84□□□□□ -1.64
SCFD1-204ENST00000463622 NLRX1Q86UT6 975 aa4.84□□□□□ -1.64
SCFD1-204ENST00000463622 BRF1Q92994 677 aa4.84□□□□□ -1.64
SCFD1-204ENST00000463622 TOX2Q96NM4 488 aa4.84□□□□□ -1.64
SCFD1-204ENST00000463622 METTL5Q9NRN9 209 aaKnown RBP4.84□□□□□ -1.64
SCFD1-204ENST00000463622 AP5S1Q9NUS5 200 aa4.84□□□□□ -1.64
SCFD1-204ENST00000463622 KDRP35968 1356 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 TOGARAM1Q9Y4F4 1720 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 NCAPD2Q15021 1401 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 TCAF2A6NFQ2 919 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 POLRMTO00411 1230 aaKnown RBP4.83□□□□□ -1.64
SCFD1-204ENST00000463622 RTP1P59025 263 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 PAK2Q13177 524 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 KCNA10Q16322 511 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 AXDND1Q5T1B0 1012 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-204ENST00000463622 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 IRF2BP1Q8IU81 584 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 IFNL2Q8IZJ0 200 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 ABHD8Q96I13 439 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 PRKRIP1Q9H875 184 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-204ENST00000463622 CD320Q9NPF0 282 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 GINM1Q9NU53 330 aa4.83□□□□□ -1.64
SCFD1-204ENST00000463622 GPR55Q9Y2T6 319 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-204ENST00000463622 DOT1LQ8TEK3 1739 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 ZSCAN22P10073 491 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 SNX17Q15036 470 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 FBLN7Q53RD9 439 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 INTS3Q68E01 1043 aaKnown RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 UNC5AQ6ZN44 842 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 C7orf61Q8IZ16 206 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 DSCC1Q9BVC3 393 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 ZNF552Q9H707 407 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 SRP68Q9UHB9 627 aaKnown RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 KIF20BQ96Q89 1820 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 CNTNAP1P78357 1384 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 C5P01031 1676 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 PASKQ96RG2 1323 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 USP42Q9H9J4 1324 aaKnown RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 KIAA1551Q9HCM1 1747 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 FADS2P1A8MWK0 482 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 SCAMP3O14828 347 aaKnown RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 NRDCO43847 1150 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 VAV1P15498 845 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 TNNT2P45379 298 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 LBX1P52954 281 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 PMS1P54277 932 aaKnown RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 DLG4P78352 724 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 METTL16Q86W50 562 aaKnown RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 LSRQ86X29 649 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-204ENST00000463622 TTLL6Q8N841 843 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 DHRS1Q96LJ7 313 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 ERVK13-1Q9NX77 482 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 EFR3BQ9Y2G0 817 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 FLT4P35916 1363 aa4.82□□□□□ -1.64
SCFD1-204ENST00000463622 UBR3Q6ZT12 1888 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 MAP2P11137 1827 aaKnown RBP4.81□□□□□ -1.64
SCFD1-204ENST00000463622 SMG6Q86US8 1419 aaKnown RBP4.81□□□□□ -1.64
SCFD1-204ENST00000463622 H0Y8X5 98 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 MED14OSP0DP75 135 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 HSPA8P11142 646 aaKnown RBP4.81□□□□□ -1.64
SCFD1-204ENST00000463622 GLDCP23378 1020 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 BMP8BP34820 402 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 KIR2DL1P43626 348 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms