RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 C4orf32Q8N8J7 132 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 CHST13Q8NET6 341 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 KIF18AQ8NI77 898 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 NPLOC4Q8TAT6 608 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 DHX58Q96C10 678 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 EPSTI1Q96J88 318 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 RNF208Q9H0X6 261 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
PTPRD-207ENST00000463477 GPCPD1Q9NPB8 672 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 FBXO40Q9UH90 709 aa11.13□□□□□ -0.63
PTPRD-207ENST00000463477 DIS3Q9Y2L1 958 aaKnown RBP11.13□□□□□ -0.63
PTPRD-207ENST00000463477 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 WNT7AO00755 349 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
PTPRD-207ENST00000463477 MYL1P05976 194 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 PRPHP41219 470 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 ORC2Q13416 577 aaPredicted RBP11.12□□□□□ -0.63
PTPRD-207ENST00000463477 KCTD2Q14681 263 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 ZNF174Q15697 407 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 CCL14Q16627 93 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 TKFCQ3LXA3 575 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 ASPRV1Q53RT3 343 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 OLFML2BQ68BL8 750 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 PDILTQ8N807 584 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 MMP19Q99542 508 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 INTS13Q9NVM9 706 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 PLXNB2O15031 1838 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 FRMPD2Q68DX3 1309 aaPredicted RBP11.12□□□□□ -0.63
PTPRD-207ENST00000463477 RPTORQ8N122 1335 aa11.12□□□□□ -0.63
PTPRD-207ENST00000463477 ARHGAP6O43182 974 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 MYCP01106 439 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 ICAM1P05362 532 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 NR1I3Q14994 352 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 CDKAL1Q5VV42 579 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 SPECC1LQ69YQ0 1117 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 PIK3AP1Q6ZUJ8 805 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 CCDC12Q8WUD4 166 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 PPP1R13BQ96KQ4 1090 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 AGBL1Q96MI9 1066 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 MED15Q96RN5 788 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 CTAGE1Q96RT6 745 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 UNC93B1Q9H1C4 597 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 HMX1Q9NP08 348 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 PAK6Q9NQU5 681 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 DNAJC25-GNG10A0A024R161 153 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 VWA3AA6NCI4 1184 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 GOLGA6L9A6NEM1 432 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 hCG_1984214I3L0E3 225 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 PARP1P09874 1014 aaKnown RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 GOLGA8HP0CJ92 632 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 EN2P19622 333 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 HOXD11P31277 338 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 TXLNAP40222 546 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 GJA8P48165 433 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 CACNB2Q08289 660 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 TRIM32Q13049 653 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 ZNF792Q3KQV3 632 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 MFSD14CQ5VZR4 134 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 TMEM139Q8IV31 216 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 GRAMD1CQ8IYS0 662 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 ZNF713Q8N859 430 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 TRERF1Q96PN7 1200 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 UBA5Q9GZZ9 404 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 ZMYND12Q9H0C1 365 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 L2HGDHQ9H9P8 463 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
PTPRD-207ENST00000463477 RMND1Q9NWS8 449 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 FLRT1Q9NZU1 646 aa11.11□□□□□ -0.63
PTPRD-207ENST00000463477 SYNRGQ9UMZ2 1314 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 COL11A1P12107 1806 aaPredicted RBP11.1□□□□□ -0.63
PTPRD-207ENST00000463477 CCDC194A0A1B0GVG4 234 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 ESYT2A0FGR8 921 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 STXBP3O00186 592 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 ZSCAN12O43309 604 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 CYTH3O43739 400 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 STX10O60499 249 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 SGPL1O95470 568 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 CDK11BP21127 795 aaKnown RBP11.1□□□□□ -0.63
PTPRD-207ENST00000463477 SNAP25P60880 206 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 CCDC174Q6PII3 467 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 APTXQ7Z2E3 356 aaKnown RBP11.1□□□□□ -0.63
PTPRD-207ENST00000463477 STAG2Q8N3U4 1231 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 MAML3Q96JK9 1138 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 CCSER1Q9C0I3 900 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 ACAD9Q9H845 621 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 MAGEF1Q9HAY2 307 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 PHLPP2Q6ZVD8 1323 aa11.1□□□□□ -0.63
PTPRD-207ENST00000463477 KLRF2D3W0D1 207 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 PGK2P07205 417 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 ALAS1P13196 640 aa11.09□□□□□ -0.63
PTPRD-207ENST00000463477 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
PTPRD-207ENST00000463477 PBX1P40424 430 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms