RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SPIRE1Q08AE8 756 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 STK38Q15208 465 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 DUSP28Q4G0W2 176 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 SH3TC2Q8TF17 1288 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 COPS5Q92905 334 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 TBC1D22BQ9NU19 505 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 PKD2L1Q9P0L9 805 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 FBXO2Q9UK22 296 aaPredicted RBP15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 FAM184BQ9ULE4 1060 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 GNEQ9Y223 722 aaKnown RBP15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 HTTP42858 3142 aa15.69■□□□□ 0.1
PHACTR4-203ENST00000463428 NCLP19338 710 aaKnown RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 MARCKSP29966 332 aaPredicted RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 TXKP42681 527 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 FXR2P51116 673 aaKnown RBP eCLIP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 TNFAIP2Q03169 654 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 GRIN1Q05586 938 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 NEDD9Q14511 834 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 CELF3Q5SZQ8 465 aaKnown RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 GJC2Q5T442 439 aaPredicted RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 LRCH2Q5VUJ6 765 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 SCAND2PQ9GZW5 306 aaPredicted RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 TTC12Q9H892 705 aaPredicted RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 GDPD2Q9HCC8 539 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 VAV3Q9UKW4 847 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 PCDHA12Q9UN75 941 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 TELO2Q9Y4R8 837 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 SRPRBQ9Y5M8 271 aaKnown RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 WDR81Q562E7 1941 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 NKRFO15226 690 aaKnown RBP eCLIP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 SEPT4O43236 478 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 FARP2O94887 1054 aaPredicted RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 GGPS1O95749 300 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 AKR1A1P14550 325 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 ARHGAP1Q07960 439 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 PPP2R5CQ13362 524 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 CYFIP1Q7L576 1253 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 GIMAP8Q8ND71 665 aaPredicted RBP15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 KCNG4Q8TDN1 519 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 SPATA32Q96LK8 384 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 TEKT3Q9BXF9 490 aa15.68■□□□□ 0.1
PHACTR4-203ENST00000463428 MARCH6O60337 910 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 GAS7O60861 476 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 CCNE2O96020 404 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 GH1P01241 217 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 TECP42680 631 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 PDIA5Q14554 519 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 AXDND1Q5T1B0 1012 aaPredicted RBP15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 METTL7BQ6UX53 244 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 DTHD1Q6ZMT9 781 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 IGSF22Q8N9C0 903 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 EMID1Q96A84 441 aaPredicted RBP15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 FERMT2Q96AC1 680 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 LENG1Q96BZ8 264 aaPredicted RBP15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 SDF4Q9BRK5 362 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 UNC45AQ9H3U1 944 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 PCDHA7Q9UN72 937 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 Q9Y3F1 56 aa15.67■□□□□ 0.1
PHACTR4-203ENST00000463428 EML1O00423 815 aa15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 DUSP11O75319 330 aaKnown RBP15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 ATG7O95352 703 aa15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 NKX3-2P78367 333 aa15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 SLC9C1Q4G0N8 1177 aa15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 DHX37Q8IY37 1157 aaKnown RBP15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 KRI1Q8N9T8 703 aaKnown RBP15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 HMX1Q9NP08 348 aaPredicted RBP15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 SLC9A2Q9UBY0 812 aa15.66■□□□□ 0.1
PHACTR4-203ENST00000463428 ELP1O95163 1332 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 GSTTP1A0A1W2PQM5 241 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 VWA3AA6NCI4 1184 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 DDX39AO00148 427 aaKnown RBP15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 SORBS3O60504 671 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 CUTAO60888 179 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 CNGA1P29973 690 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 KRT76Q01546 638 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 LAMC2Q13753 1193 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 HSDL1Q3SXM5 330 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 LHX8Q68G74 356 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 ZNF746Q6NUN9 644 aaPredicted RBP15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 TMEM87AQ8NBN3 555 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 ARMC5Q96C12 935 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 CSRNP2Q9H175 543 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 UNC93B1Q9H1C4 597 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 MLXIPQ9HAP2 919 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 JPH1Q9HDC5 661 aaPredicted RBP15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 DDX20Q9UHI6 824 aaKnown RBP15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 FRMPD3Q5JV73 1810 aa15.65■□□□□ 0.1
PHACTR4-203ENST00000463428 POTEMA6NI47 508 aa15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 CTAGE5O15320 804 aa15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 DYNC1LI2O43237 492 aaPredicted RBP15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 LONP1P36776 959 aaKnown RBP15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 GJA9P57773 515 aa15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 ACTR2P61160 394 aa15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 IRX5P78411 483 aaPredicted RBP15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 MTFR1Q15390 333 aa15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 ABHD15Q6UXT9 468 aa15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 ZNF333Q96JL9 665 aa15.64■□□□□ 0.09
PHACTR4-203ENST00000463428 GPR20Q99678 358 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms