RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CANXP27824 592 aaKnown RBP6.13□□□□□ -1.43
USH2A-203ENST00000463147 MLLT6P55198 1093 aaPredicted RBP6.13□□□□□ -1.43
USH2A-203ENST00000463147 KCNAB2Q13303 367 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 FHL2Q14192 279 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 TRMT10BQ6PF06 316 aaKnown RBP6.13□□□□□ -1.43
USH2A-203ENST00000463147 Q8TCH9 128 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 RASGRP4Q8TDF6 673 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 GPRASP2Q96D09 838 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 HSPBP1Q9NZL4 362 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 ADAM29Q9UKF5 820 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 PCDHB10Q9UN67 800 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 H7BY64 318 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 SOX9P48436 509 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 ABHD18Q0P651 414 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 FOXE3Q13461 319 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 INF2Q27J81 1249 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 EMC4Q5J8M3 183 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 TEPPQ6URK8 271 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 PHOSPHO1Q8TCT1 267 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 DIO2Q92813 273 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.12□□□□□ -1.43
USH2A-203ENST00000463147 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 C11orf21Q9P2W6 132 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 PCDHB4Q9Y5E5 795 aa6.12□□□□□ -1.43
USH2A-203ENST00000463147 FPR2P25090 351 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 INHBEP58166 350 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 MIIPQ5JXC2 388 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 KIAA1211LQ6NV74 962 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 VHLLQ6RSH7 139 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 CCDC81Q6ZN84 652 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 RALYLQ86SE5 291 aaKnown RBP6.11□□□□□ -1.43
USH2A-203ENST00000463147 JAZF1Q86VZ6 243 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 TRIM59Q8IWR1 403 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 AMER2Q8N7J2 671 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
USH2A-203ENST00000463147 ZCCHC14Q8WYQ9 949 aaKnown RBP6.11□□□□□ -1.43
USH2A-203ENST00000463147 ZSWIM3Q96MP5 696 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 OSBPL2Q9H1P3 480 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 MEGF9Q9H1U4 602 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 NKX2-4Q9H2Z4 354 aa6.11□□□□□ -1.43
USH2A-203ENST00000463147 SBNO2Q9Y2G9 1366 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 STK10O94804 968 aaKnown RBP6.1□□□□□ -1.43
USH2A-203ENST00000463147 CDK11BP21127 795 aaKnown RBP6.1□□□□□ -1.43
USH2A-203ENST00000463147 CASP7P55210 303 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 PPP2R5EQ16537 467 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 STEAP3Q658P3 488 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 GTF2IRD2BQ6EKJ0 949 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 GTF2IRD2Q86UP8 949 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 VPS37DQ86XT2 251 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 IFNL2Q8IZJ0 200 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 NPLOC4Q8TAT6 608 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 FRS2Q8WU20 508 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 GINM1Q9NU53 330 aa6.1□□□□□ -1.43
USH2A-203ENST00000463147 CDK11AQ9UQ88 783 aaPredicted RBP6.1□□□□□ -1.43
USH2A-203ENST00000463147 TCRBV5S2A0A599 114 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 ANKRD62A6NC57 917 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 PPM1GO15355 546 aaPredicted RBP6.09□□□□□ -1.43
USH2A-203ENST00000463147 MEFVO15553 781 aaPredicted RBP6.09□□□□□ -1.43
USH2A-203ENST00000463147 TADA3O75528 432 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 HOXC12P31275 282 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 MCM7P33993 719 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 ETFBP38117 255 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 BCL6P41182 706 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 SERINC3Q13530 473 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 BMS1Q14692 1282 aaKnown RBP6.09□□□□□ -1.43
USH2A-203ENST00000463147 NCAPHQ15003 741 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 EGFLAMQ63HQ2 1017 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 SDE2Q6IQ49 451 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 TRIM48Q8IWZ4 208 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 CCDC140Q96MF4 163 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 HIRIP3Q9BW71 556 aaPredicted RBP6.09□□□□□ -1.43
USH2A-203ENST00000463147 ZNF408Q9H9D4 720 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 APEX2Q9UBZ4 518 aa6.09□□□□□ -1.43
USH2A-203ENST00000463147 ING1Q9UK53 422 aaPredicted RBP6.09□□□□□ -1.43
USH2A-203ENST00000463147 NPIPB8E9PQR5 432 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 DGKIO75912 1065 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 CPP00450 1065 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 NASPP49321 788 aaPredicted RBP6.08□□□□□ -1.44
USH2A-203ENST00000463147 LSAMPQ13449 338 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 TESK1Q15569 626 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 ACBD5Q5T8D3 534 aaPredicted RBP6.08□□□□□ -1.44
USH2A-203ENST00000463147 CYP4F22Q6NT55 531 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 RNF207Q6ZRF8 634 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 ARRDC4Q8NCT1 418 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 EDAQ92838 391 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 SMOC1Q9H4F8 434 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 EFR3BQ9Y2G0 817 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 SLC4A7Q9Y6M7 1214 aa6.08□□□□□ -1.44
USH2A-203ENST00000463147 LRG1P02750 347 aa6.07□□□□□ -1.44
USH2A-203ENST00000463147 DPTQ07507 201 aa6.07□□□□□ -1.44
USH2A-203ENST00000463147 ZNF568Q3ZCX4 644 aa6.07□□□□□ -1.44
USH2A-203ENST00000463147 Q6ZUG5 572 aa6.07□□□□□ -1.44
USH2A-203ENST00000463147 REXO1L1PQ8IX06 675 aa6.07□□□□□ -1.44
USH2A-203ENST00000463147 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
USH2A-203ENST00000463147 SEC16BQ96JE7 1060 aa6.07□□□□□ -1.44
USH2A-203ENST00000463147 MRGPRX3Q96LB0 322 aa6.07□□□□□ -1.44
USH2A-203ENST00000463147 LMF1Q96S06 567 aa6.07□□□□□ -1.44
USH2A-203ENST00000463147 PTPN18Q99952 460 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms