RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ATP2A2P16615 1042 aaKnown RBP8.36□□□□□ -1.07
PTPRF-210ENST00000463041 HSPA4P34932 840 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 FGD1P98174 961 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 FUT2Q10981 343 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 SEMA3FQ13275 785 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 RAB11FIP4Q86YS3 637 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 FBXL16Q8N461 479 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 MAFAQ8NHW3 353 aaPredicted RBP8.36□□□□□ -1.07
PTPRF-210ENST00000463041 GPRASP2Q96D09 838 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 GPR20Q99678 358 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 BCAS3Q9H6U6 928 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 BRPF3Q9ULD4 1205 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 PCDHA6Q9UN73 950 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 PCDHA8Q9Y5H6 950 aa8.36□□□□□ -1.07
PTPRF-210ENST00000463041 TRANK1O15050 2925 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 KLF18A0A0U1RQI7 1052 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 C17orf102A2RUQ5 167 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 hCG_1984214I3L0E3 225 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 DLL1O00548 723 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 SORBS3O60504 671 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 EFCAB14O75071 495 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 CXCL10P02778 98 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 LGALS2P05162 132 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 PSMA5P28066 241 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 ZNF200P98182 395 aaPredicted RBP8.35□□□□□ -1.07
PTPRF-210ENST00000463041 GPNMBQ14956 572 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 TRIM71Q2Q1W2 868 aaKnown RBP8.35□□□□□ -1.07
PTPRF-210ENST00000463041 PPP1R18Q6NYC8 613 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 BLOC1S2Q6QNY1 142 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 LRRC8DQ7L1W4 858 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 HEATR3Q7Z4Q2 680 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 ZNF713Q8N859 430 aaPredicted RBP8.35□□□□□ -1.07
PTPRF-210ENST00000463041 SEPT1Q8WYJ6 367 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 DHX38Q92620 1227 aaKnown RBP8.35□□□□□ -1.07
PTPRF-210ENST00000463041 ATP6V0A1Q93050 837 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 TCEANC2Q96MN5 208 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 SLC9A7Q96T83 725 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 GAS2L1Q99501 681 aaPredicted RBP8.35□□□□□ -1.07
PTPRF-210ENST00000463041 NKX2-4Q9H2Z4 354 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 RNPEPQ9H4A4 650 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 RIC8AQ9NPQ8 531 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 JADE2Q9NQC1 790 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 FAM217BQ9NTX9 383 aaPredicted RBP8.35□□□□□ -1.07
PTPRF-210ENST00000463041 SNX14Q9Y5W7 946 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 UBIAD1Q9Y5Z9 338 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 NCOR1O75376 2440 aa8.35□□□□□ -1.07
PTPRF-210ENST00000463041 ABHD14A-ACY1A0A1B0GW23 586 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 SMCO2A6NFE2 343 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 GOLGA8AA7E2F4 631 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 GOLGA8BA8MQT2 603 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 ATP9AO75110 1047 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 NEFLP07196 543 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 SMIM10L2AP0DMW4 78 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 SMIM10L2BP0DMW5 78 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 KCNA2P16389 499 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 ITGB5P18084 799 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 CDC27P30260 824 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 HOXC8P31273 242 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
PTPRF-210ENST00000463041 RABGGTBP53611 331 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 NAPAP54920 295 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 IKBKEQ14164 716 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 UBE2SQ16763 222 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 ZNF618Q5T7W0 954 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 WWC2Q6AWC2 1192 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 MCTP2Q6DN12 878 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 CNKSR3Q6P9H4 555 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 Q6ZUG5 572 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 SERINC5Q86VE9 423 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPRF-210ENST00000463041 TNPO1Q92973 898 aaKnown RBP8.34□□□□□ -1.07
PTPRF-210ENST00000463041 JAKMIP1Q96N16 626 aaKnown RBP8.34□□□□□ -1.07
PTPRF-210ENST00000463041 MXRA8Q9BRK3 442 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 AGXT2Q9BYV1 514 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 PRDM12Q9H4Q4 367 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 BARHL2Q9NY43 387 aa8.34□□□□□ -1.07
PTPRF-210ENST00000463041 ZNF215Q9UL58 517 aaPredicted RBP8.34□□□□□ -1.07
PTPRF-210ENST00000463041 YBX2Q9Y2T7 364 aaKnown RBP8.34□□□□□ -1.07
PTPRF-210ENST00000463041 PRRC2BQ5JSZ5 2229 aaKnown RBP8.34□□□□□ -1.07
PTPRF-210ENST00000463041 MYH9P35579 1960 aaKnown RBP8.33□□□□□ -1.08
PTPRF-210ENST00000463041 EMSYQ7Z589 1322 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 NRCAMQ92823 1304 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 GSTTP1A0A1W2PQM5 241 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 RSPH10B2B2RC85 870 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 STXBP3O00186 592 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 TREHO43280 583 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 PRPF3O43395 683 aaKnown RBP8.33□□□□□ -1.08
PTPRF-210ENST00000463041 NBNO60934 754 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 CAND2O75155 1236 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 RSPH10BP0C881 870 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 RPS6KB1P23443 525 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 THPOP40225 353 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 KCNJ6P48051 423 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 METAP2P50579 478 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPRF-210ENST00000463041 ADCY7P51828 1080 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 EVCP57679 992 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 ADAM17P78536 824 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 APOBRQ0VD83 1088 aa8.33□□□□□ -1.08
PTPRF-210ENST00000463041 AP3B2Q13367 1082 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms