RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	TREH	O43280	583 aa		12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	LGALS2	P05162	132 aa		12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	CYP21A2	P08686	494 aa		12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	LINC00271	P0C7V0	271 aa		12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	ICAM3	P32942	547 aa		12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	COL19A1	Q14993	1142 aa		12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	ZBED2	Q9BTP6	218 aa		12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	UBE2Z	Q9H832	354 aa	Predicted RBP	12.96	□□□□□ -0.33
PTPN7-204	ENST00000462815	RSPH10B2	B2RC85	870 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815		H3BRB1	525 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	RSPH10B	P0C881	870 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	SMIM10L2A	P0DMW4	78 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	SMIM10L2B	P0DMW5	78 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	THPO	P40225	353 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	PTH1R	Q03431	593 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	LEXM	Q3ZCV2	418 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	FAM117B	Q6P1L5	589 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	EXOC6	Q8TAG9	804 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	GPR20	Q99678	358 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	RNPEP	Q9H4A4	650 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	TUT1	Q9H6E5	874 aa	Known RBP	12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	INSL6	Q9Y581	213 aa		12.95	□□□□□ -0.34
PTPN7-204	ENST00000462815	C17orf102	A2RUQ5	167 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	SPATA31C2	B4DYI2	1134 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	PI4K2B	G5E9Z4	385 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	GPR37L1	O60883	481 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	CAND2	O75155	1236 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	POLR2M	P0CAP2	368 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	CCND2	P30279	289 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	HOXD11	P31277	338 aa	Predicted RBP	12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	ANTXR2	P58335	489 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	METTL7B	Q6UX53	244 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	HOMER1	Q86YM7	354 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	NEK9	Q8TD19	979 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	ATP6V0A1	Q93050	837 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	TOP1MT	Q969P6	601 aa		12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	RC3H2	Q9HBD1	1191 aa	Known RBP	12.94	□□□□□ -0.34
PTPN7-204	ENST00000462815	RALGAPA2	Q2PPJ7	1873 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	NLRC5	Q86WI3	1866 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	PNMA6F	A0A0J9YX94	578 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	COL9A3	Q14050	684 aa	Predicted RBP	12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	EPC2	Q52LR7	807 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	FAM26D	Q5JW98	314 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	TTC22	Q5TAA0	569 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	FCHSD1	Q86WN1	690 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	TRIM50	Q86XT4	487 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	FAM178B	Q8IXR5	827 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	MYOCD	Q8IZQ8	938 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	FBXO22	Q8NEZ5	403 aa		12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	MRPL38	Q96DV4	380 aa	Known RBP	12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.93	□□□□□ -0.34
PTPN7-204	ENST00000462815		H3BNC9	293 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	MEIS2	O14770	477 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	STAM2	O75886	525 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	AMH	P03971	560 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	IL9	P15248	144 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	TMEM31	Q5JXX7	168 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	CYFIP1	Q7L576	1253 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	IGDCC4	Q8TDY8	1250 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	MLXIP	Q9HAP2	919 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	SETD4	Q9NVD3	440 aa		12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.92	□□□□□ -0.34
PTPN7-204	ENST00000462815	FAM86C2P	A6NEL3	165 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	GRXCR2	A6NFK2	248 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815		E7EWF7	191 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	PIK3CD	O00329	1044 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	FIBP	O43427	364 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	CTSH	P09668	335 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	KCNA5	P22460	613 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	CHML	P26374	656 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	MGAT3	Q09327	533 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	RPAIN	Q86UA6	219 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	LMBR1	Q8WVP7	490 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	USP26	Q9BXU7	913 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	EHMT1	Q9H9B1	1298 aa		12.91	□□□□□ -0.34
PTPN7-204	ENST00000462815	IFIT3	O14879	490 aa	Known RBP	12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	CHRNA1	P02708	482 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	TRAF1	Q13077	416 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	NEDD9	Q14511	834 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	WTAP	Q15007	396 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	GNPTAB	Q3T906	1256 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	PCNX4	Q63HM2	1172 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	USP17L6P	Q6QN14	398 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	RUFY4	Q6ZNE9	571 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	SEPT8	Q92599	483 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	SAMD11	Q96NU1	681 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	MAP3K14	Q99558	947 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	SENP7	Q9BQF6	1050 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	SPZ1	Q9BXG8	430 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	LY9	Q9HBG7	655 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	RTEL1	Q9NZ71	1219 aa		12.9	□□□□□ -0.34
PTPN7-204	ENST00000462815	C5orf67	F2Z3F1	127 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	SGSM2	O43147	1006 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	ATP9A	O75110	1047 aa		12.89	□□□□□ -0.35
PTPN7-204	ENST00000462815	KCNA2	P16389	499 aa		12.89	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms