RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 FSD1Q9BTV5 496 aa17.87■□□□□ 0.45
APP-211ENST00000462267 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
APP-211ENST00000462267 COL20A1Q9P218 1284 aa17.87■□□□□ 0.45
APP-211ENST00000462267 ADGRA3Q8IWK6 1321 aa17.87■□□□□ 0.45
APP-211ENST00000462267 FAM186AA6NE01 2351 aa17.87■□□□□ 0.45
APP-211ENST00000462267 KIAA1217Q5T5P2 1943 aa17.86■□□□□ 0.45
APP-211ENST00000462267 SNHG28P0DPA3 235 aa17.86■□□□□ 0.45
APP-211ENST00000462267 RRP1P56182 461 aaKnown RBP17.86■□□□□ 0.45
APP-211ENST00000462267 ZMYM1Q5SVZ6 1142 aa17.86■□□□□ 0.45
APP-211ENST00000462267 ARHGEF16Q5VV41 709 aa17.86■□□□□ 0.45
APP-211ENST00000462267 EFHBQ8N7U6 833 aa17.86■□□□□ 0.45
APP-211ENST00000462267 SPATA33Q96N06 139 aa17.86■□□□□ 0.45
APP-211ENST00000462267 OSBPL7Q9BZF2 842 aa17.86■□□□□ 0.45
APP-211ENST00000462267 CLEC1BQ9P126 229 aa17.86■□□□□ 0.45
APP-211ENST00000462267 ABCB11O95342 1321 aa17.86■□□□□ 0.45
APP-211ENST00000462267 ATG2AQ2TAZ0 1938 aa17.86■□□□□ 0.45
APP-211ENST00000462267 H0Y858 1186 aa17.85■□□□□ 0.45
APP-211ENST00000462267 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
APP-211ENST00000462267 FOXP2O15409 715 aa17.85■□□□□ 0.45
APP-211ENST00000462267 NR3C2P08235 984 aa17.85■□□□□ 0.45
APP-211ENST00000462267 CTSHP09668 335 aa17.85■□□□□ 0.45
APP-211ENST00000462267 CAMK1Q14012 370 aa17.85■□□□□ 0.45
APP-211ENST00000462267 HSDL1Q3SXM5 330 aa17.85■□□□□ 0.45
APP-211ENST00000462267 CELF3Q5SZQ8 465 aaKnown RBP17.85■□□□□ 0.45
APP-211ENST00000462267 GPATCH4Q5T3I0 446 aaKnown RBP17.85■□□□□ 0.45
APP-211ENST00000462267 TSHZ3Q63HK5 1081 aa17.85■□□□□ 0.45
APP-211ENST00000462267 KCNV1Q6PIU1 500 aa17.85■□□□□ 0.45
APP-211ENST00000462267 P2RX5Q93086 422 aa17.85■□□□□ 0.45
APP-211ENST00000462267 TTC14Q96N46 770 aa17.85■□□□□ 0.45
APP-211ENST00000462267 C16orf70Q9BSU1 422 aa17.85■□□□□ 0.45
APP-211ENST00000462267 PHF7Q9BWX1 381 aaPredicted RBP17.85■□□□□ 0.45
APP-211ENST00000462267 RC3H2Q9HBD1 1191 aaKnown RBP17.85■□□□□ 0.45
APP-211ENST00000462267 TLR9Q9NR96 1032 aa17.85■□□□□ 0.45
APP-211ENST00000462267 TOMM22Q9NS69 142 aa17.85■□□□□ 0.45
APP-211ENST00000462267 PLAGL2Q9UPG8 496 aa17.85■□□□□ 0.45
APP-211ENST00000462267 TREHO43280 583 aa17.84■□□□□ 0.45
APP-211ENST00000462267 SMIM10L2AP0DMW4 78 aa17.84■□□□□ 0.45
APP-211ENST00000462267 SMIM10L2BP0DMW5 78 aa17.84■□□□□ 0.45
APP-211ENST00000462267 EIF2AK2P19525 551 aaKnown RBP17.84■□□□□ 0.45
APP-211ENST00000462267 ICAM3P32942 547 aa17.84■□□□□ 0.45
APP-211ENST00000462267 NAALADL2Q58DX5 795 aa17.84■□□□□ 0.45
APP-211ENST00000462267 ASCL5Q7RTU5 278 aa17.84■□□□□ 0.45
APP-211ENST00000462267 PXMP2Q9NR77 195 aa17.84■□□□□ 0.45
APP-211ENST00000462267 USP15Q9Y4E8 981 aaPredicted RBP17.84■□□□□ 0.45
APP-211ENST00000462267 PRR23AA6NEV1 266 aa17.83■□□□□ 0.44
APP-211ENST00000462267 H3BRB1 525 aa17.83■□□□□ 0.44
APP-211ENST00000462267 GALR2O43603 387 aaPredicted RBP17.83■□□□□ 0.44
APP-211ENST00000462267 HSPD1P10809 573 aaKnown RBP17.83■□□□□ 0.44
APP-211ENST00000462267 GNAT1P11488 350 aa17.83■□□□□ 0.44
APP-211ENST00000462267 BTG3Q14201 252 aaPredicted RBP17.83■□□□□ 0.44
APP-211ENST00000462267 CDC37Q16543 378 aaPredicted RBP17.83■□□□□ 0.44
APP-211ENST00000462267 FAM26DQ5JW98 314 aa17.83■□□□□ 0.44
APP-211ENST00000462267 RNPEPQ9H4A4 650 aa17.83■□□□□ 0.44
APP-211ENST00000462267 TUT1Q9H6E5 874 aaKnown RBP17.83■□□□□ 0.44
APP-211ENST00000462267 TRPC6Q9Y210 931 aa17.83■□□□□ 0.44
APP-211ENST00000462267 CSPG5O95196 566 aa17.82■□□□□ 0.44
APP-211ENST00000462267 GGPS1O95749 300 aa17.82■□□□□ 0.44
APP-211ENST00000462267 TGFB3P10600 412 aa17.82■□□□□ 0.44
APP-211ENST00000462267 ATF7P17544 494 aaPredicted RBP17.82■□□□□ 0.44
APP-211ENST00000462267 RRP12Q5JTH9 1297 aaKnown RBP17.82■□□□□ 0.44
APP-211ENST00000462267 ZNF689Q96CS4 500 aaPredicted RBP17.82■□□□□ 0.44
APP-211ENST00000462267 RPGRIP1Q96KN7 1286 aa17.82■□□□□ 0.44
APP-211ENST00000462267 MRPL11Q9Y3B7 192 aaKnown RBP17.82■□□□□ 0.44
APP-211ENST00000462267 PLXNA3P51805 1871 aa17.82■□□□□ 0.44
APP-211ENST00000462267 RGS20O76081 388 aa17.81■□□□□ 0.44
APP-211ENST00000462267 NBL1P41271 181 aa17.81■□□□□ 0.44
APP-211ENST00000462267 ALX1Q15699 326 aa17.81■□□□□ 0.44
APP-211ENST00000462267 PTPN21Q16825 1174 aa17.81■□□□□ 0.44
APP-211ENST00000462267 ADGRD2Q7Z7M1 963 aa17.81■□□□□ 0.44
APP-211ENST00000462267 UBA5Q9GZZ9 404 aa17.81■□□□□ 0.44
APP-211ENST00000462267 MYH7BA7E2Y1 1941 aa17.8■□□□□ 0.44
APP-211ENST00000462267 KDM4AO75164 1064 aa17.8■□□□□ 0.44
APP-211ENST00000462267 GOLGA8HP0CJ92 632 aa17.8■□□□□ 0.44
APP-211ENST00000462267 ID4P47928 161 aa17.8■□□□□ 0.44
APP-211ENST00000462267 NRIP1P48552 1158 aa17.8■□□□□ 0.44
APP-211ENST00000462267 SPPL3Q8TCT6 385 aa17.8■□□□□ 0.44
APP-211ENST00000462267 RIPOR3Q96MK2 946 aa17.8■□□□□ 0.44
APP-211ENST00000462267 MLXIPQ9HAP2 919 aa17.8■□□□□ 0.44
APP-211ENST00000462267 BARX2Q9UMQ3 279 aaPredicted RBP17.8■□□□□ 0.44
APP-211ENST00000462267 MYO15AQ9UKN7 3530 aa17.8■□□□□ 0.44
APP-211ENST00000462267 TTC41PQ6P2S7 1318 aa17.79■□□□□ 0.44
APP-211ENST00000462267 ENPP3O14638 875 aa17.79■□□□□ 0.44
APP-211ENST00000462267 SORBS3O60504 671 aa17.79■□□□□ 0.44
APP-211ENST00000462267 DGKIO75912 1065 aa17.79■□□□□ 0.44
APP-211ENST00000462267 GLP2RO95838 553 aa17.79■□□□□ 0.44
APP-211ENST00000462267 LGALS2P05162 132 aa17.79■□□□□ 0.44
APP-211ENST00000462267 ITGB1P05556 798 aa17.79■□□□□ 0.44
APP-211ENST00000462267 UBA1P22314 1058 aaKnown RBP17.79■□□□□ 0.44
APP-211ENST00000462267 DNAJB1P25685 340 aa17.79■□□□□ 0.44
APP-211ENST00000462267 VPS53Q5VIR6 699 aa17.79■□□□□ 0.44
APP-211ENST00000462267 SUSD6Q92537 303 aa17.79■□□□□ 0.44
APP-211ENST00000462267 PDCD2LQ9BRP1 358 aa17.79■□□□□ 0.44
APP-211ENST00000462267 USP26Q9BXU7 913 aa17.79■□□□□ 0.44
APP-211ENST00000462267 CPVLQ9H3G5 476 aa17.79■□□□□ 0.44
APP-211ENST00000462267 SETD4Q9NVD3 440 aa17.79■□□□□ 0.44
APP-211ENST00000462267 CCDC171Q6TFL3 1326 aa17.78■□□□□ 0.44
APP-211ENST00000462267 GVINP1Q7Z2Y8 2422 aa17.78■□□□□ 0.44
APP-211ENST00000462267 CFBP00751 764 aa17.78■□□□□ 0.44
APP-211ENST00000462267 MYCLP12524 364 aaPredicted RBP17.78■□□□□ 0.44
APP-211ENST00000462267 SP2Q02086 613 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms