RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 RNF111Q6ZNA4 994 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 DTX1Q86Y01 620 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 TRIM59Q8IWR1 403 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 PIGBQ92521 554 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 UBE2FQ969M7 185 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 MRGPRX3Q96LB0 322 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 FGD4Q96M96 766 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 CCDC140Q96MF4 163 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 DNAJC7Q99615 494 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 SPATA9Q9BWV2 254 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 PCDH11XQ9BZA7 1347 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 PCDH11YQ9BZA8 1340 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 SLC12A5Q9H2X9 1139 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 LMCD1Q9NZU5 365 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 CGGBP1Q9UFW8 167 aaPredicted RBP6.63□□□□□ -1.35
COPS3-204ENST00000462236 AKT3Q9Y243 479 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 TMA7Q9Y2S6 64 aaKnown RBP6.63□□□□□ -1.35
COPS3-204ENST00000462236 ARFGEF2Q9Y6D5 1785 aa6.63□□□□□ -1.35
COPS3-204ENST00000462236 TNRC18O15417 2968 aaPredicted RBP6.63□□□□□ -1.35
COPS3-204ENST00000462236 CASP8AP2Q9UKL3 1982 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 TRPM7Q96QT4 1865 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 SCN11AQ9UI33 1791 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 CCDC163A0A0D9SF12 145 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 A0A0G2JLW4 131 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 ADAM23O75077 832 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 CAPNS1P04632 268 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 MMP10P09238 476 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 DPEP1P16444 411 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 TPP2P29144 1249 aaPredicted RBP6.62□□□□□ -1.35
COPS3-204ENST00000462236 HOXA10P31260 410 aaPredicted RBP6.62□□□□□ -1.35
COPS3-204ENST00000462236 CD97P48960 835 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 POU4F1Q01851 419 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 ITPK1Q13572 414 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 C2orf27AQ580R0 203 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 LRRN4CLQ8ND94 238 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 LTV1Q96GA3 475 aaPredicted RBP6.62□□□□□ -1.35
COPS3-204ENST00000462236 TCTN2Q96GX1 697 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 ZSWIM5Q9P217 1185 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 LRP2BPQ9P2M1 347 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 APEX2Q9UBZ4 518 aa6.62□□□□□ -1.35
COPS3-204ENST00000462236 ROCK2O75116 1388 aaKnown RBP6.61□□□□□ -1.35
COPS3-204ENST00000462236 INSRP06213 1382 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 KDM2BQ8NHM5 1336 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 A0A1W2PQU0 124 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 SHISA3A0PJX4 238 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 H3BS24 57 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 ITGAVP06756 1048 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 ITGB7P26010 798 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 PCBP3P57721 371 aaKnown RBP6.61□□□□□ -1.35
COPS3-204ENST00000462236 SPATC1Q76KD6 591 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 HDGFL2Q7Z4V5 671 aaPredicted RBP6.61□□□□□ -1.35
COPS3-204ENST00000462236 VSIG10LQ86VR7 867 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 ZNF227Q86WZ6 799 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
COPS3-204ENST00000462236 SMC1BQ8NDV3 1235 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 NOL6Q9H6R4 1146 aaKnown RBP6.61□□□□□ -1.35
COPS3-204ENST00000462236 CWC22Q9HCG8 908 aaKnown RBP6.61□□□□□ -1.35
COPS3-204ENST00000462236 SLC5A6Q9Y289 635 aa6.61□□□□□ -1.35
COPS3-204ENST00000462236 KIF24Q5T7B8 1368 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 ADAMTSL1Q8N6G6 1762 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 FGFR1P11362 822 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 GYS1P13807 737 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 SPINK2P20155 84 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 CANXP27824 592 aaKnown RBP6.6□□□□□ -1.35
COPS3-204ENST00000462236 AMPD2Q01433 879 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 AOC3Q16853 763 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 GIMAP6Q6P9H5 292 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 NLGN1Q8N2Q7 840 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 SYNPOQ8N3V7 929 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 USHBP1Q8N6Y0 703 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 BCL7CQ8WUZ0 217 aaPredicted RBP6.6□□□□□ -1.35
COPS3-204ENST00000462236 BRF1Q92994 677 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 AARSD1Q9BTE6 412 aaKnown RBP6.6□□□□□ -1.35
COPS3-204ENST00000462236 CYP26B1Q9NR63 512 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 DUSP13Q9UII6 198 aa6.6□□□□□ -1.35
COPS3-204ENST00000462236 COL11A2P13942 1736 aaPredicted RBP6.59□□□□□ -1.35
COPS3-204ENST00000462236 TONSLQ96HA7 1378 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 THSD7BQ9C0I4 1608 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 TRAV20A0A0B4J274 112 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 ADCY3O60266 1144 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 ZNF205O95201 554 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 SCG5P05408 212 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 VAV1P15498 845 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 HOXC12P31275 282 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 CTSKP43235 329 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 AMPHP49418 695 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 TMF1P82094 1093 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 C16orf71Q8IYS4 520 aaPredicted RBP6.59□□□□□ -1.35
COPS3-204ENST00000462236 LILRB2Q8N423 598 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 ZSWIM2Q8NEG5 633 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 ADCY4Q8NFM4 1077 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 RAPGEF4Q8WZA2 1011 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 PPP1R14AQ96A00 147 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 NKX2-4Q9H2Z4 354 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 TERF2IPQ9NYB0 399 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 PFDN2Q9UHV9 154 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 ASAP1Q9ULH1 1129 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 SLX4Q8IY92 1834 aa6.59□□□□□ -1.35
COPS3-204ENST00000462236 SSU72P8A0A1W2PR75 194 aa6.58□□□□□ -1.36
COPS3-204ENST00000462236 GLTPD2A6NH11 291 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms