RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 EVI5LQ96CN4 794 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 ATG4CQ96DT6 458 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 TGS1Q96RS0 853 aaKnown RBP7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 FSD1Q9BTV5 496 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 SEZ6LQ9BYH1 1024 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 FTOQ9C0B1 505 aaKnown RBP eCLIP7.03□□□□□ -1.286e-7■■□□□ 12.1
SMARCC1-204ENST00000462198 OSBPL3Q9H4L5 887 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 FKBPLQ9UIM3 349 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 NCOR2Q9Y618 2525 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 FLT1P17948 1338 aa7.02□□□□□ -1.28
SMARCC1-204ENST00000462198 MYO15AQ9UKN7 3530 aa7.02□□□□□ -1.28
SMARCC1-204ENST00000462198 TRIP12Q14669 1992 aaPredicted RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 COL11A1P12107 1806 aaPredicted RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 PTPRSQ13332 1948 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 A0A1W2PRG0 241 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 FAM181BA6NEQ2 426 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 AXIN1O15169 862 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 FLOT1O75955 427 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 F12P00748 615 aaPredicted RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 CYP2C9P11712 490 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 PDE6AP16499 860 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 GUCY1A2P33402 732 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 STAT3P40763 770 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 VCPP55072 806 aaKnown RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 MARSP56192 900 aaKnown RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 NKX3-2P78367 333 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 ZXDAP98168 799 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 C8orf34Q49A92 452 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 KIAA1755Q5JYT7 1200 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 TTC22Q5TAA0 569 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 TMED8Q6PL24 325 aaPredicted RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 MAMDC4Q6UXC1 1216 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 TMCO2Q7Z6W1 182 aaPredicted RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 RIOX2Q8IUF8 465 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 DHX37Q8IY37 1157 aaKnown RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 ADSSL1Q8N142 457 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 DEPDC4Q8N2C3 294 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 KBTBD3Q8NAB2 608 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 RILPL2Q969X0 211 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 PABPC5Q96DU9 382 aaKnown RBP7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 DDX11Q96FC9 970 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 CTNNA3Q9UI47 895 aa7.02□□□□□ -1.29
SMARCC1-204ENST00000462198 ZNF532Q9HCE3 1301 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 EP300Q09472 2414 aaPredicted RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 MAGEB6P1A0A0J9YX57 407 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 GOLGA6L3A6NEY3 463 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 TERTO14746 1132 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 RNF113AO15541 343 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 LZTS3O60299 673 aaPredicted RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 KIF20AO95235 890 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 PTMAP06454 111 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 ZFYP08048 801 aaPredicted RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 IQCF3P0C7M6 154 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 SUPT20HL2P0C7V6 817 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 RASA1P20936 1047 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 VAMP1P23763 118 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 RFC2P35250 354 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 ADD2P35612 726 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 SLC4A3P48751 1232 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 PSMC6P62333 389 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 NCOA4Q13772 614 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 SEPT2Q15019 361 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 SUZ12Q15022 739 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 UBE3CQ15386 1083 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 SMAD2Q15796 467 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 NBPF20Q3BBV1 942 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 PLA2G2CQ5R387 149 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 AXDND1Q5T1B0 1012 aaPredicted RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 NOL8Q76FK4 1167 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 DGLUCYQ7Z3D6 616 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 ADGRA1Q86SQ6 560 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 SKAP1Q86WV1 359 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 ANKMY2Q8IV38 441 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 MIGA1Q8NAN2 632 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 FAM200AQ8TCP9 573 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 TRIM44Q96DX7 344 aaPredicted RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 POP1Q99575 1024 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 RAD9AQ99638 391 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 ALDH8A1Q9H2A2 487 aaPredicted RBP7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 ABHD16BQ9H3Z7 469 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 TOR4AQ9NXH8 423 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 SERPINB13Q9UIV8 391 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 DMDP11532 3685 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 SIP14410 1827 aa7.01□□□□□ -1.29
SMARCC1-204ENST00000462198 TCRBV5S4A2TA0A5A2 114 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 LINC01553A4QN01 128 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 STXBP3O00186 592 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 CLGNO14967 610 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 ZEB2O60315 1214 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 BAIAP3O94812 1187 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 TCF3P15923 654 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 NBL1P41271 181 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 KCNJ6P48051 423 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 TNFAIP2Q03169 654 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 PTPROQ16827 1216 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 SLFNL1Q499Z3 407 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 TCEAL5Q5H9L2 206 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 CERS3Q8IU89 383 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 SPICE1Q8N0Z3 855 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 PHTF2Q8N3S3 785 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms