RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PARNO95453 639 aaKnown RBP21.75■■□□□ 1.07
VARS-220ENST00000461874 HSPA4P34932 840 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 RCAN1P53805 252 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.75■■□□□ 1.072e-6■■■■□ 25.6
VARS-220ENST00000461874 WNT8BQ93098 351 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 GPRASP2Q96D09 838 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 PCDHA6Q9UN73 950 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 PCDHA8Q9Y5H6 950 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 V9GY48 417 aaPredicted RBP21.75■■□□□ 1.07
VARS-220ENST00000461874 MYO9BQ13459 2157 aa21.75■■□□□ 1.07
VARS-220ENST00000461874 GOLGA8AA7E2F4 631 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 GOLGA8BA8MQT2 603 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 CPA1P15085 419 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 MYOGP15173 224 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 ITGB5P18084 799 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 HOXC8P31273 242 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 TYW1BQ6NUM6 668 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 TRAF7Q6Q0C0 670 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 GIMAP8Q8ND71 665 aaPredicted RBP21.74■■□□□ 1.07
VARS-220ENST00000461874 PHOSPHO2Q8TCD6 241 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 CDHR1Q96JP9 859 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 PRDM12Q9H4Q4 367 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 TELO2Q9Y4R8 837 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 SNX14Q9Y5W7 946 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 UBIAD1Q9Y5Z9 338 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 CUL9Q8IWT3 2517 aa21.74■■□□□ 1.07
VARS-220ENST00000461874 TRIP12Q14669 1992 aaPredicted RBP21.74■■□□□ 1.07
VARS-220ENST00000461874 TET1Q8NFU7 2136 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 C17orf102A2RUQ5 167 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 DLL1O00548 723 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 NBNO60934 754 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 ATP9AO75110 1047 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 BAIAP3O94812 1187 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 CXCL10P02778 98 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 SMIM10L2AP0DMW4 78 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 SMIM10L2BP0DMW5 78 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 CDC27P30260 824 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 NAPAP54920 295 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 FGD1P98174 961 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 PPP1R18Q6NYC8 613 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 SERINC5Q86VE9 423 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 TEX2Q8IWB9 1127 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 JAKMIP1Q96N16 626 aaKnown RBP21.73■■□□□ 1.07
VARS-220ENST00000461874 SLC9A7Q96T83 725 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 RIC8AQ9NPQ8 531 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 PRUNE2Q8WUY3 3088 aa21.73■■□□□ 1.07
VARS-220ENST00000461874 KCNA2P16389 499 aa21.72■■□□□ 1.07
VARS-220ENST00000461874 ZNF618Q5T7W0 954 aa21.72■■□□□ 1.07
VARS-220ENST00000461874 Q6ZUG5 572 aa21.72■■□□□ 1.07
VARS-220ENST00000461874 ATP6V0A1Q93050 837 aa21.72■■□□□ 1.07
VARS-220ENST00000461874 GAS2L1Q99501 681 aaPredicted RBP21.72■■□□□ 1.07
VARS-220ENST00000461874 RNPEPQ9H4A4 650 aa21.72■■□□□ 1.07
VARS-220ENST00000461874 EHMT1Q9H9B1 1298 aa21.72■■□□□ 1.07
VARS-220ENST00000461874 TANC1Q9C0D5 1861 aa21.72■■□□□ 1.07
VARS-220ENST00000461874 hCG_1984214I3L0E3 225 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 STXBP3O00186 592 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 REC8O95072 547 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 SP4Q02446 784 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 MTMR1Q13613 665 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 UTP14CQ5TAP6 766 aaKnown RBP21.71■■□□□ 1.07
VARS-220ENST00000461874 CNKSR3Q6P9H4 555 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 BLOC1S2Q6QNY1 142 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 TRIM50Q86XT4 487 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 ZNF713Q8N859 430 aaPredicted RBP21.71■■□□□ 1.07
VARS-220ENST00000461874 JADE2Q9NQC1 790 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 BARHL2Q9NY43 387 aa21.71■■□□□ 1.07
VARS-220ENST00000461874 ZNF215Q9UL58 517 aaPredicted RBP21.71■■□□□ 1.07
VARS-220ENST00000461874 NAP1L2Q9ULW6 460 aaPredicted RBP21.71■■□□□ 1.07
VARS-220ENST00000461874 MAFGO15525 162 aa21.7■■□□□ 1.06
VARS-220ENST00000461874 FOSP01100 380 aaPredicted RBP21.7■■□□□ 1.06
VARS-220ENST00000461874 ADD1P35611 737 aaKnown RBP21.7■■□□□ 1.06
VARS-220ENST00000461874 METAP2P50579 478 aaKnown RBP eCLIP21.7■■□□□ 1.065e-7■■■■■ 33.6
VARS-220ENST00000461874 ADCY7P51828 1080 aa21.7■■□□□ 1.06
VARS-220ENST00000461874 APOBRQ0VD83 1088 aa21.7■■□□□ 1.06
VARS-220ENST00000461874 MBTPS1Q14703 1052 aa21.7■■□□□ 1.06
VARS-220ENST00000461874 PPP2R2DQ66LE6 453 aa21.7■■□□□ 1.06
VARS-220ENST00000461874 HERC6Q8IVU3 1022 aa21.7■■□□□ 1.06
VARS-220ENST00000461874 FBXL16Q8N461 479 aa21.7■■□□□ 1.06
VARS-220ENST00000461874 BRF1Q92994 677 aa21.7■■□□□ 1.06
VARS-220ENST00000461874 CHD7Q9P2D1 2997 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 CCDC196A0A1B0GTZ2 297 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 SMCO2A6NFE2 343 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 TREHO43280 583 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 THPOP40225 353 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 KCNJ6P48051 423 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 WDR5P61964 334 aaKnown RBP21.69■■□□□ 1.06
VARS-220ENST00000461874 ADGRE1Q14246 886 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 TCTN1Q2MV58 587 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 SETD4Q9NVD3 440 aa21.69■■□□□ 1.06
VARS-220ENST00000461874 GSTTP1A0A1W2PQM5 241 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 RSPH10B2B2RC85 870 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 NEFLP07196 543 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 CA3P07451 260 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 RSPH10BP0C881 870 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 GNAT1P11488 350 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 RPS6KB1P23443 525 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 TCF7P36402 384 aaPredicted RBP21.68■■□□□ 1.06
VARS-220ENST00000461874 USP38Q8NB14 1042 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 SEPT1Q8WYJ6 367 aa21.68■■□□□ 1.06
VARS-220ENST00000461874 PGBD1Q96JS3 809 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms