RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ZNF200P98182 395 aaPredicted RBP20.6■□□□□ 0.89
SSB-206ENST00000461708 MBTPS1Q14703 1052 aa20.6■□□□□ 0.89
SSB-206ENST00000461708 C17orf102A2RUQ5 167 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 TNFRSF10AO00220 468 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 LGR5O75473 907 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 GJB5O95377 273 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 SEMA3FQ13275 785 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 GIMAP8Q8ND71 665 aaPredicted RBP20.59■□□□□ 0.89
SSB-206ENST00000461708 SMARCC2Q8TAQ2 1214 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 ATP6V0A1Q93050 837 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 ZFP91Q96JP5 570 aaPredicted RBP20.59■□□□□ 0.89
SSB-206ENST00000461708 RAD9AQ99638 391 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 GPR20Q99678 358 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 ESYT1Q9BSJ8 1104 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 BRWD1Q9NSI6 2320 aa20.59■□□□□ 0.89
SSB-206ENST00000461708 EPOPA6NHQ4 379 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 CCDC69A6NI79 296 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 RSPH10B2B2RC85 870 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 SLC27A2O14975 620 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 SORBS3O60504 671 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 ARHGEF15O94989 841 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 RSPH10BP0C881 870 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 SMIM10L2AP0DMW4 78 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 SMIM10L2BP0DMW5 78 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 GNAT1P11488 350 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 DEFB103AP81534 67 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 MKRN4PQ13434 485 aaPredicted RBP20.58■□□□□ 0.89
SSB-206ENST00000461708 NECTIN1Q15223 517 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 AAK1Q2M2I8 961 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 USP17L6PQ6QN14 398 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 NFXL1Q6ZNB6 911 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 CYFIP1Q7L576 1253 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 SRBD1Q8N5C6 995 aaKnown RBP20.58■□□□□ 0.89
SSB-206ENST00000461708 PIBF1Q8WXW3 757 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 ARNTL2Q8WYA1 636 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 ZBED2Q9BTP6 218 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 MYL10Q9BUA6 226 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 BCAS3Q9H6U6 928 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 LMCD1Q9NZU5 365 aa20.58■□□□□ 0.89
SSB-206ENST00000461708 XIRP2A4UGR9 3374 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 RFXAPO00287 272 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 THPOP40225 353 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 TCTN1Q2MV58 587 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 CREB3L3Q68CJ9 461 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 NLRX1Q86UT6 975 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 TEX2Q8IWB9 1127 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 ADAMTS19Q8TE59 1207 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 KAT6AQ92794 2004 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 CDHR1Q96JP9 859 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 RNPEPQ9H4A4 650 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 PSTPIP2Q9H939 334 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 CERS4Q9HA82 394 aa20.57■□□□□ 0.88
SSB-206ENST00000461708 ZNF215Q9UL58 517 aaPredicted RBP20.57■□□□□ 0.88
SSB-206ENST00000461708 MICAL3Q7RTP6 2002 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 DOCK5Q9H7D0 1870 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 PLEKHA8P1O95397 391 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 PLEKHG4Q58EX7 1191 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 SGMS1Q86VZ5 419 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 IL27Q8NEV9 243 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 GPRASP2Q96D09 838 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 COG5Q9UP83 839 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 SLC12A7Q9Y666 1083 aa20.56■□□□□ 0.88
SSB-206ENST00000461708 LCHNA4D1U4 455 aa20.55■□□□□ 0.88
SSB-206ENST00000461708 LPXNO60711 386 aa20.55■□□□□ 0.88
SSB-206ENST00000461708 ERVK-21P61565 698 aa20.55■□□□□ 0.88
SSB-206ENST00000461708 ADAM17P78536 824 aa20.55■□□□□ 0.88
SSB-206ENST00000461708 GRB10Q13322 594 aa20.55■□□□□ 0.88
SSB-206ENST00000461708 MICALL1Q8N3F8 863 aa20.55■□□□□ 0.88
SSB-206ENST00000461708 FANCBQ8NB91 859 aa20.55■□□□□ 0.88
SSB-206ENST00000461708 TREHO43280 583 aa20.54■□□□□ 0.88
SSB-206ENST00000461708 BMP1P13497 986 aa20.54■□□□□ 0.88
SSB-206ENST00000461708 BMP2KLQ5H9B9 411 aa20.54■□□□□ 0.88
SSB-206ENST00000461708 RNF20Q5VTR2 975 aa20.54■□□□□ 0.88
SSB-206ENST00000461708 TMTC3Q6ZXV5 915 aa20.54■□□□□ 0.88
SSB-206ENST00000461708 DBF4BQ8NFT6 615 aa20.54■□□□□ 0.88
SSB-206ENST00000461708 INSL6Q9Y581 213 aa20.54■□□□□ 0.88
SSB-206ENST00000461708 NRCAMQ92823 1304 aa20.53■□□□□ 0.88
SSB-206ENST00000461708 MAFGO15525 162 aa20.53■□□□□ 0.88
SSB-206ENST00000461708 AMHP03971 560 aa20.53■□□□□ 0.88
SSB-206ENST00000461708 HTRA4P83105 476 aaPredicted RBP20.53■□□□□ 0.88
SSB-206ENST00000461708 TMCO2Q7Z6W1 182 aaPredicted RBP20.53■□□□□ 0.88
SSB-206ENST00000461708 RPAINQ86UA6 219 aa20.53■□□□□ 0.88
SSB-206ENST00000461708 SEPT8Q92599 483 aa20.53■□□□□ 0.88
SSB-206ENST00000461708 TGS1Q96RS0 853 aaKnown RBP20.53■□□□□ 0.88
SSB-206ENST00000461708 UHRF1Q96T88 793 aaPredicted RBP20.53■□□□□ 0.88
SSB-206ENST00000461708 ANO2Q9NQ90 1003 aa20.53■□□□□ 0.88
SSB-206ENST00000461708 SETD4Q9NVD3 440 aa20.53■□□□□ 0.88
SSB-206ENST00000461708 LINC01553A4QN01 128 aa20.52■□□□□ 0.88
SSB-206ENST00000461708 KCNA2P16389 499 aa20.52■□□□□ 0.88
SSB-206ENST00000461708 ITGB5P18084 799 aa20.52■□□□□ 0.88
SSB-206ENST00000461708 COL9A3Q14050 684 aaPredicted RBP20.52■□□□□ 0.88
SSB-206ENST00000461708 SKIV2LQ15477 1246 aaKnown RBP20.52■□□□□ 0.88
SSB-206ENST00000461708 FAM26DQ5JW98 314 aa20.52■□□□□ 0.88
SSB-206ENST00000461708 SIP14410 1827 aa20.52■□□□□ 0.88
SSB-206ENST00000461708 COL4A4P53420 1690 aaPredicted RBP20.51■□□□□ 0.87
SSB-206ENST00000461708 SPDYE3A6NKU9 549 aa20.51■□□□□ 0.87
SSB-206ENST00000461708 TSGA10IPQ3SY00 556 aa20.51■□□□□ 0.87
SSB-206ENST00000461708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.51■□□□□ 0.87
SSB-206ENST00000461708 SPRED2Q7Z698 418 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms