RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 CLDND1Q9NY35 253 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 LRP2BPQ9P2M1 347 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 MYOTQ9UBF9 498 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 TCAF1Q9Y4C2 921 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 B4GALT4O60513 344 aa6.97□□□□□ -1.29
CFHR3-204ENST00000461558 AMHP03971 560 aa6.97□□□□□ -1.29
CFHR3-204ENST00000461558 KCNJ6P48051 423 aa6.97□□□□□ -1.29
CFHR3-204ENST00000461558 NFATC3Q12968 1075 aa6.97□□□□□ -1.29
CFHR3-204ENST00000461558 R3HDM1Q15032 1099 aaKnown RBP6.97□□□□□ -1.29
CFHR3-204ENST00000461558 C6orf15Q6UXA7 325 aaPredicted RBP6.97□□□□□ -1.29
CFHR3-204ENST00000461558 PHOSPHO1Q8TCT1 267 aa6.97□□□□□ -1.29
CFHR3-204ENST00000461558 MEGF9Q9H1U4 602 aa6.97□□□□□ -1.29
CFHR3-204ENST00000461558 EPB41L1Q9H4G0 881 aa6.97□□□□□ -1.29
CFHR3-204ENST00000461558 BARX1Q9HBU1 254 aaPredicted RBP6.97□□□□□ -1.29
CFHR3-204ENST00000461558 GFRA1P56159 465 aa6.96□□□□□ -1.3
CFHR3-204ENST00000461558 DENND5AQ6IQ26 1287 aa6.96□□□□□ -1.3
CFHR3-204ENST00000461558 FAM178BQ8IXR5 827 aa6.96□□□□□ -1.3
CFHR3-204ENST00000461558 HSPBP1Q9NZL4 362 aa6.96□□□□□ -1.3
CFHR3-204ENST00000461558 HS3ST3A1Q9Y663 406 aa6.96□□□□□ -1.3
CFHR3-204ENST00000461558 B2RBV5 119 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 MUSKO15146 869 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 SUSD5O60279 629 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 COL6A1P12109 1028 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 TMEM145Q8NBT3 493 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 C1orf159Q96HA4 380 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 SEMA4AQ9H3S1 761 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 SMOC1Q9H4F8 434 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 RBPJLQ9UBG7 517 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 ZDHHC9Q9Y397 364 aa6.95□□□□□ -1.3
CFHR3-204ENST00000461558 SMAD7O15105 426 aaKnown RBP6.94□□□□□ -1.3
CFHR3-204ENST00000461558 MAFKO60675 156 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 ZNF623O75123 536 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 KLF10Q13118 480 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 SPDYAQ5MJ70 313 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 PROSER1Q86XN7 944 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 NUDT10Q8NFP7 164 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 NUDT11Q96G61 164 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 TGIF2Q9GZN2 237 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 ACBD3Q9H3P7 528 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 ACTR10Q9NZ32 417 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 ASH2LQ9UBL3 628 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 CCDC180Q9P1Z9 1646 aa6.94□□□□□ -1.3
CFHR3-204ENST00000461558 MFAP1P55081 439 aaKnown RBP6.93□□□□□ -1.3
CFHR3-204ENST00000461558 LARP1BQ659C4 914 aaKnown RBP6.93□□□□□ -1.3
CFHR3-204ENST00000461558 CYP4F22Q6NT55 531 aa6.93□□□□□ -1.3
CFHR3-204ENST00000461558 DTX3Q8N9I9 347 aa6.93□□□□□ -1.3
CFHR3-204ENST00000461558 TTLL11Q8NHH1 800 aa6.93□□□□□ -1.3
CFHR3-204ENST00000461558 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
CFHR3-204ENST00000461558 TESMINQ9Y4I5 508 aa6.93□□□□□ -1.3
CFHR3-204ENST00000461558 NPFFR2Q9Y5X5 522 aa6.93□□□□□ -1.3
CFHR3-204ENST00000461558 KRIT1O00522 736 aa6.92□□□□□ -1.3
CFHR3-204ENST00000461558 KLHL18O94889 574 aa6.92□□□□□ -1.3
CFHR3-204ENST00000461558 SLC35F1Q5T1Q4 408 aa6.92□□□□□ -1.3
CFHR3-204ENST00000461558 RALYLQ86SE5 291 aaKnown RBP6.92□□□□□ -1.3
CFHR3-204ENST00000461558 Q8TCH9 128 aa6.92□□□□□ -1.3
CFHR3-204ENST00000461558 DLL4Q9NR61 685 aa6.92□□□□□ -1.3
CFHR3-204ENST00000461558 CNOT4O95628 575 aaKnown RBP6.91□□□□□ -1.3
CFHR3-204ENST00000461558 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
CFHR3-204ENST00000461558 TNNI3KQ59H18 835 aa6.91□□□□□ -1.3
CFHR3-204ENST00000461558 PHF19Q5T6S3 580 aa6.91□□□□□ -1.3
CFHR3-204ENST00000461558 VASNQ6EMK4 673 aa6.91□□□□□ -1.3
CFHR3-204ENST00000461558 MRM1Q6IN84 353 aaKnown RBP6.91□□□□□ -1.3
CFHR3-204ENST00000461558 TRIM48Q8IWZ4 208 aa6.91□□□□□ -1.3
CFHR3-204ENST00000461558 SLC6A20Q9NP91 592 aa6.91□□□□□ -1.3
CFHR3-204ENST00000461558 ING1Q9UK53 422 aaPredicted RBP6.91□□□□□ -1.3
CFHR3-204ENST00000461558 CAPNS1P04632 268 aa6.9□□□□□ -1.3
CFHR3-204ENST00000461558 SMAD2Q15796 467 aaKnown RBP6.9□□□□□ -1.3
CFHR3-204ENST00000461558 Q6ZUG5 572 aa6.9□□□□□ -1.3
CFHR3-204ENST00000461558 PIP4K2CQ8TBX8 421 aa6.9□□□□□ -1.3
CFHR3-204ENST00000461558 CCSER2Q9H7U1 834 aa6.9□□□□□ -1.3
CFHR3-204ENST00000461558 SEC61A2Q9H9S3 476 aa6.9□□□□□ -1.3
CFHR3-204ENST00000461558 MRVI1Q9Y6F6 885 aa6.9□□□□□ -1.3
CFHR3-204ENST00000461558 SLC27A2O14975 620 aa6.89□□□□□ -1.31
CFHR3-204ENST00000461558 DDAH1O94760 285 aa6.89□□□□□ -1.31
CFHR3-204ENST00000461558 KNG1P01042 644 aa6.89□□□□□ -1.31
CFHR3-204ENST00000461558 CHGBP05060 677 aa6.89□□□□□ -1.31
CFHR3-204ENST00000461558 CLEC4DQ8WXI8 215 aa6.89□□□□□ -1.31
CFHR3-204ENST00000461558 JAM3Q9BX67 310 aa6.89□□□□□ -1.31
CFHR3-204ENST00000461558 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
CFHR3-204ENST00000461558 GRIA2P42262 883 aa6.88□□□□□ -1.31
CFHR3-204ENST00000461558 GRIN1Q05586 938 aa6.88□□□□□ -1.31
CFHR3-204ENST00000461558 MAP4K2Q12851 820 aa6.88□□□□□ -1.31
CFHR3-204ENST00000461558 HS1BP3Q53T59 392 aa6.88□□□□□ -1.31
CFHR3-204ENST00000461558 MICAL1Q8TDZ2 1067 aa6.88□□□□□ -1.31
CFHR3-204ENST00000461558 MRRFQ96E11 262 aaKnown RBP6.88□□□□□ -1.31
CFHR3-204ENST00000461558 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
CFHR3-204ENST00000461558 GNRHR2Q96P88 292 aa6.88□□□□□ -1.31
CFHR3-204ENST00000461558 GPR27Q9NS67 375 aa6.88□□□□□ -1.31
CFHR3-204ENST00000461558 PPARGC1AQ9UBK2 798 aaKnown RBP6.88□□□□□ -1.31
CFHR3-204ENST00000461558 FOXS1O43638 330 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 FBXO21O94952 628 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 CKMP06732 381 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 CSF2RBP32927 897 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 TGFB2P61812 414 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 FXNQ16595 210 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 SKIDA1Q1XH10 827 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 TCTN3Q6NUS6 607 aa6.87□□□□□ -1.31
CFHR3-204ENST00000461558 GPR155Q7Z3F1 870 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms