RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CPLX2Q6PUV4 134 aaKnown RBP17.61■□□□□ 0.41
VARS-219ENST00000461328 METTL7BQ6UX53 244 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 OTOP2Q7RTS6 562 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 GTF2IRD1Q9UHL9 959 aa17.61■□□□□ 0.41
VARS-219ENST00000461328 HAS3O00219 553 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 PFKMP08237 780 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 IFNAR1P17181 557 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 DNAJB2P25686 324 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 RFC2P35250 354 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 CYFIP1Q7L576 1253 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 DEFB128Q7Z7B8 93 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 CAGE1Q8TC20 777 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 ZNF274Q96GC6 653 aaPredicted RBP17.6■□□□□ 0.41
VARS-219ENST00000461328 PGBD1Q96JS3 809 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 GUCD1Q96NT3 240 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 RNF26Q9BY78 433 aaPredicted RBP17.6■□□□□ 0.41
VARS-219ENST00000461328 ANO3Q9BYT9 981 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 SEMA6BQ9H3T3 888 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 BCAS3Q9H6U6 928 aa17.6■□□□□ 0.41
VARS-219ENST00000461328 CXXC1Q9P0U4 656 aaPredicted RBP17.6■□□□□ 0.41
VARS-219ENST00000461328 TMEM265A0A087WTH1 108 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 GRXCR1A8MXD5 290 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 FOSP01100 380 aaPredicted RBP17.59■□□□□ 0.41
VARS-219ENST00000461328 IQCF3P0C7M6 154 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
VARS-219ENST00000461328 TEX2Q8IWB9 1127 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 CCDC148Q8NFR7 591 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 GPRASP2Q96D09 838 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 CDHR1Q96JP9 859 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 C16orf70Q9BSU1 422 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 TTYH1Q9H313 450 aaPredicted RBP17.59■□□□□ 0.41
VARS-219ENST00000461328 C6orf50Q9HD87 102 aa17.59■□□□□ 0.41
VARS-219ENST00000461328 ZBBXA8MT70 800 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 H3BRB1 525 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 LGALS2P05162 132 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 ACTN1P12814 892 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 SP4Q02446 784 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 AP3B2Q13367 1082 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 MTMR1Q13613 665 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 ANKRD1Q15327 319 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 NTRK3Q16288 839 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 GIMAP8Q8ND71 665 aaPredicted RBP17.58■□□□□ 0.4
VARS-219ENST00000461328 TIFAQ96CG3 184 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 GPR20Q99678 358 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 SENP7Q9BQF6 1050 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 SLKQ9H2G2 1235 aaPredicted RBP17.58■□□□□ 0.4
VARS-219ENST00000461328 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
VARS-219ENST00000461328 TMEM260Q9NX78 707 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.4
VARS-219ENST00000461328 TANC1Q9C0D5 1861 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 ESYT2A0FGR8 921 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 SEC24BO95487 1268 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 ITGB5P18084 799 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 PKN1Q16512 942 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 JAKMIP3Q5VZ66 844 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 REXO1Q8N1G1 1221 aaKnown RBP17.57■□□□□ 0.4
VARS-219ENST00000461328 AFAP1L1Q8TED9 768 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 DHX38Q92620 1227 aaKnown RBP17.57■□□□□ 0.4
VARS-219ENST00000461328 VWCEQ96DN2 955 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 CTAGE1Q96RT6 745 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 CDX2Q99626 313 aaPredicted RBP17.57■□□□□ 0.4
VARS-219ENST00000461328 PBX4Q9BYU1 374 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 FTOQ9C0B1 505 aaKnown RBP eCLIP17.57■□□□□ 0.4
VARS-219ENST00000461328 VPS54Q9P1Q0 977 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 UBIAD1Q9Y5Z9 338 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 SLC4A7Q9Y6M7 1214 aa17.57■□□□□ 0.4
VARS-219ENST00000461328 CDKL5O76039 1030 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 SELPP16109 830 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 GNA11P29992 359 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 ZNF76P36508 570 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 PBX2P40425 430 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 AK2P54819 239 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 PTK7Q13308 1070 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 UTP14CQ5TAP6 766 aaKnown RBP17.56■□□□□ 0.4
VARS-219ENST00000461328 LRRC8DQ7L1W4 858 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 BICD2Q8TD16 824 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 ZMYND12Q9H0C1 365 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 JADE2Q9NQC1 790 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 MSRAQ9UJ68 235 aa17.56■□□□□ 0.4
VARS-219ENST00000461328 ZNF215Q9UL58 517 aaPredicted RBP17.56■□□□□ 0.4
VARS-219ENST00000461328 C17orf102A2RUQ5 167 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 ATP9AO75110 1047 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 CKBP12277 381 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 KCNA2P16389 499 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 NEK4P51957 841 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 NLRP5P59047 1200 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 ZNF200P98182 395 aaPredicted RBP17.55■□□□□ 0.4
VARS-219ENST00000461328 RBL2Q08999 1139 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 RAB30Q15771 203 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 TRIM50Q86XT4 487 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 ZNF576Q9H609 170 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 TPCN1Q9ULQ1 816 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 SCN5AQ14524 2016 aa17.55■□□□□ 0.4
VARS-219ENST00000461328 DOCK5Q9H7D0 1870 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 MAFGO15525 162 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 DEXIO95424 95 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 SMIM10L2AP0DMW4 78 aa17.54■□□□□ 0.4
VARS-219ENST00000461328 SMIM10L2BP0DMW5 78 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms