RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SIX6OS1Q8N1H7 587 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 SNX19Q92543 992 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 DONSONQ9NYP3 566 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 STX18Q9P2W9 335 aaKnown RBP9.7□□□□□ -0.86
BRCA1-205ENST00000461221 LCMT1Q9UIC8 334 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 TNKSO95271 1327 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 FAM95CA0A1B0GW59 222 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 hCG_1984214I3L0E3 225 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 ATP5HO75947 161 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 HSPA4LO95757 839 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 HDAC4P56524 1084 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 KCTD2Q14681 263 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 SLFN13Q68D06 897 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 ANGPTL8Q6UXH0 198 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 ZNF713Q8N859 430 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-205ENST00000461221 ENOX1Q8TC92 643 aaKnown RBP9.7□□□□□ -0.86
BRCA1-205ENST00000461221 P2RX5Q93086 422 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 WDR11Q9BZH6 1224 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 KMT5AQ9NQR1 393 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 AKT3Q9Y243 479 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 L3MBTL1Q9Y468 752 aa9.7□□□□□ -0.86
BRCA1-205ENST00000461221 PPP6R2O75170 966 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 E2F6O75461 281 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 KRT8P05787 483 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 GTF2IP78347 998 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 NNTQ13423 1086 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 PTK2BQ14289 1009 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 ARMCX2Q7L311 632 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 SYT2Q8N9I0 419 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 MAML1Q92585 1016 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 NR1H4Q96RI1 486 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 TSC22D3Q99576 134 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 AP5M1Q9H0R1 490 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 BTG4Q9NY30 223 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 NOP53Q9NZM5 478 aaKnown RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 CREB3O43889 395 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 EAPPQ56P03 285 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 TRIM55Q9BYV6 548 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 PCDHA7Q9UN72 937 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 KIAA1024Q9UPX6 916 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 DIS3Q9Y2L1 958 aaKnown RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 GOLGA8SH3BPF8 625 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 TADA3O75528 432 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 GCFC2P16383 781 aaKnown RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 ASPRV1Q53RT3 343 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 RNF139Q8WU17 664 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 AMNQ9BXJ7 453 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 TMEM60Q9H2L4 133 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 COG4Q9H9E3 785 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 SORBS3O60504 671 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 SRGAP2CP0DJJ0 459 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 CTSWP56202 376 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 CUL1Q13616 776 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 ZNF827Q17R98 1081 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 WDR75Q8IWA0 830 aaKnown RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 ANKRD13CQ8N6S4 541 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 SCG3Q8WXD2 468 aaKnown RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 ING2Q9H160 280 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 IKBKBO14920 756 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 ZSCAN20P17040 1043 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 CIITAP33076 1130 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 PTGDRQ13258 359 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 ACAD11Q709F0 780 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 FRA10AC1Q70Z53 315 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 PDIK1LQ8N165 341 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 LRRC47Q8N1G4 583 aaKnown RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 NAF1Q96HR8 494 aaKnown RBP9.69□□□□□ -0.86
BRCA1-205ENST00000461221 PHACTR3Q96KR7 559 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 DACH2Q96NX9 599 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 ZMYND12Q9H0C1 365 aa9.69□□□□□ -0.86
BRCA1-205ENST00000461221 DUOX2Q9NRD8 1548 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 KPNA7A9QM74 516 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 KRT37O76014 449 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ZBED1O96006 694 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ZFXP17010 805 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 PCYT1AP49585 367 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 RPS8P62241 208 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ADCY1Q08828 1119 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 GPATCH4Q5T3I0 446 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 OR6B2Q6IFH4 312 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 PATL1Q86TB9 770 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 STX19Q8N4C7 294 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 CDHR1Q96JP9 859 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 WARS2Q9UGM6 360 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 TMEM232C9JQI7 657 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ESRRBO95718 433 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 NR1D1P20393 614 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 FBXW4P57775 412 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 DYNLT1P63172 113 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 DYNC1I2Q13409 638 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ALCAMQ13740 583 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 CDC37Q16543 378 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 PYROXD1Q8WU10 500 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 GPKOWQ92917 476 aaPredicted RBP eCLIP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 EXOC4Q96A65 974 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ZNF577Q9BSK1 485 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 MMTAG2Q9BU76 263 aaKnown RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 CALN1Q9BXU9 219 aa9.68□□□□□ -0.86
BRCA1-205ENST00000461221 FOXP1Q9H334 677 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-205ENST00000461221 ADD3Q9UEY8 706 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms