RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 KLRF2D3W0D1 207 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 POTEB2H3BUK9 544 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 OPA1O60313 960 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 PEX14O75381 377 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 SASH3O75995 380 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 ERLIN2O94905 339 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 CYP11B2P19099 503 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 AKAP17AQ02040 695 aaKnown RBP9.39□□□□□ -0.91
HDAC9-219ENST00000461159 SIAH1Q8IUQ4 282 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 TMEM139Q8IV31 216 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-219ENST00000461159 GPC2Q8N158 579 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 ACER1Q8TDN7 264 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 MMADHCQ9H3L0 296 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-219ENST00000461159 PICK1Q9NRD5 415 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 FANCLQ9NW38 375 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 RGL1Q9NZL6 768 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 SWAP70Q9UH65 585 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 DACH1Q9UI36 760 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 ODF2LQ9ULJ1 636 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 STK36Q9NRP7 1315 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 A0A1W2PRG0 241 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 TMEM232C9JQI7 657 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 FANCGO15287 622 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 SH3BP5O60239 455 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 DDAH1O94760 285 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 TTLL1O95922 423 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 RPS12P25398 132 aaKnown RBP9.39□□□□□ -0.91
HDAC9-219ENST00000461159 TXLNAP40222 546 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 SNAP25P60880 206 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 TUBB4BP68371 445 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 PNOCQ13519 176 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 PPP2R5BQ15173 497 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 EARS2Q5JPH6 523 aaKnown RBP9.39□□□□□ -0.91
HDAC9-219ENST00000461159 RESP18Q5W5W9 173 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 SPECC1LQ69YQ0 1117 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 TTC30AQ86WT1 665 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 CNNM3Q8NE01 707 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 EHD4Q9H223 541 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 TCP11L1Q9NUJ3 509 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 ITM2BQ9Y287 266 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 CHUKO15111 745 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 CUTAO60888 179 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 PDHBP11177 359 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TAL1P17542 331 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-219ENST00000461159 SLC8A3P57103 927 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 GOLGA8FQ08AF8 430 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 GOLGA8DPQ0D2H9 430 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TBX2Q13207 712 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-219ENST00000461159 WLSQ5T9L3 541 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TATDN1Q6P1N9 297 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 SHC4Q6S5L8 630 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 MTMR14Q8NCE2 650 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 ANKS1AQ92625 1134 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 KCNN1Q92952 543 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 ZBTB10Q96DT7 871 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TEPSINQ96N21 525 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 WDR24Q96S15 920 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 FUT8Q9BYC5 575 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TSGA10Q9BZW7 698 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TMEM165Q9HC07 324 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 IGKV6D-41A0A0C4DH26 115 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 PARP1P09874 1014 aaKnown RBP9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TRIM29Q14134 588 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 LONRF2Q1L5Z9 754 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 CCDC70Q6NSX1 233 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 FAM114A1Q8IWE2 563 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 CCDC12Q8WUD4 166 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-219ENST00000461159 ZCCHC17Q9NP64 241 aaKnown RBP9.38□□□□□ -0.91
HDAC9-219ENST00000461159 TBC1D7Q9P0N9 293 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 ATRNL1Q5VV63 1379 aa9.38□□□□□ -0.91
HDAC9-219ENST00000461159 WNT7AO00755 349 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 DEXIO95424 95 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 CALM1P0DP23 149 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 CALM2P0DP24 149 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 CALM3P0DP25 149 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 INPP5BP32019 993 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 TUBB2AQ13885 445 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 NPY5RQ15761 445 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 CEP112Q8N8E3 955 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 RASGRP4Q8TDF6 673 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 MORC4Q8TE76 937 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 ZKSCAN4Q969J2 545 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-219ENST00000461159 KIFC2Q96AC6 838 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 TUBB2BQ9BVA1 445 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 EPC1Q9H2F5 836 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 PGAP2Q9UHJ9 254 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 MYO6Q9UM54 1294 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 G3BP2Q9UN86 482 aaKnown RBP9.37□□□□□ -0.91
HDAC9-219ENST00000461159 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
HDAC9-219ENST00000461159 KIF5BP33176 963 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 NOVP48745 357 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 LMAN1P49257 510 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 CHMP4BP1P59074 171 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 GRM4Q14833 912 aa9.37□□□□□ -0.91
HDAC9-219ENST00000461159 POSTNQ15063 836 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms