RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 SLC4A10Q6U841 1118 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 SHISA2Q6UWI4 295 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.1□□□□□ -1.43
SF3A3-202ENST00000460925 TMEM57Q8N5G2 664 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 PI4KAP1Q8N8J0 262 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 RCC1LQ96I51 464 aaKnown RBP6.1□□□□□ -1.43
SF3A3-202ENST00000460925 MAP3K2Q9Y2U5 619 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 TAF1P21675 1872 aa6.1□□□□□ -1.43
SF3A3-202ENST00000460925 DDX60Q8IY21 1712 aaKnown RBP6.1□□□□□ -1.43
SF3A3-202ENST00000460925 TNRC6CQ9HCJ0 1690 aaKnown RBP6.1□□□□□ -1.43
SF3A3-202ENST00000460925 ABCC4O15439 1325 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 RNF123Q5XPI4 1314 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 MAP3K15Q6ZN16 1313 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 UBN2Q6ZU65 1347 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 TRAV20A0A0B4J274 112 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 SHOXO15266 292 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 WIPF1O43516 503 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 RPS6KA4O75676 772 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 TP53P04637 393 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 FGFR1P11362 822 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 CD247P20963 164 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 GPTP24298 496 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 IL6STP40189 918 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 ETV3P41162 512 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 HSP90AA2PQ14568 343 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 GRIK4Q16099 956 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 SV2CQ496J9 727 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 TDRD10Q5VZ19 366 aaKnown RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 LETMD1Q6P1Q0 360 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 SEZ6L2Q6UXD5 910 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 ATF7IPQ6VMQ6 1270 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 KRT26Q7Z3Y9 468 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 COL23A1Q86Y22 540 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 CCDC144CPQ8IYA2 1237 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 EXOC8Q8IYI6 725 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 TMTC2Q8N394 836 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 BEND7Q8N7W2 519 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 RNF141Q8WVD5 230 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 NINJ1Q92982 152 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 ZNF775Q96BV0 537 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 KREMEN1Q96MU8 473 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 NACC1Q96RE7 527 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 MYD88Q99836 296 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 AARSD1Q9BTE6 412 aaKnown RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 DHRS4Q9BTZ2 278 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 YIPF2Q9BWQ6 316 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 ASPNQ9BXN1 380 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 TEX13AQ9BXU3 409 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-202ENST00000460925 GBP3Q9H0R5 595 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 SEMA6CQ9H3T2 930 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 HYPKQ9NX55 129 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 PRR13Q9NZ81 148 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 TFCP2L1Q9NZI6 479 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 WHRNQ9P202 907 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 CD2APQ9Y5K6 639 aa6.09□□□□□ -1.43
SF3A3-202ENST00000460925 ANKRD31Q8N7Z5 1873 aa6.09□□□□□ -1.44
SF3A3-202ENST00000460925 PXDNLA1KZ92 1463 aa6.09□□□□□ -1.44
SF3A3-202ENST00000460925 GOLGB1Q14789 3259 aaKnown RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 COL11A2P13942 1736 aaPredicted RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 COL4A1P02462 1669 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 USP42Q9H9J4 1324 aaKnown RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 DNAJC25-GNG10A0A024R161 153 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 PLD2O14939 933 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 SLITRK5O94991 958 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 ALX3O95076 343 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 IGKV5-2P06315 115 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 USP11P51784 963 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 AUHQ13825 339 aaKnown RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 R3HDM1Q15032 1099 aaKnown RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 SLC15A2Q16348 729 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 FNDC3BQ53EP0 1204 aaKnown RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 TM4SF20Q53R12 229 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 HSP90AB4PQ58FF6 505 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 FOXB2Q5VYV0 432 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 ZKSCAN2Q63HK3 967 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 TBC1D9BQ66K14 1250 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 DCAF15Q66K64 600 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 CDPF1Q6NVV7 123 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 KIF6Q6ZMV9 814 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 ZNF227Q86WZ6 799 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 ITPRIPQ8IWB1 547 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 SCUBE1Q8IWY4 988 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 SYNE4Q8N205 404 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 BVESQ8NE79 360 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 EXOC6Q8TAG9 804 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 DNAAF4Q8WXU2 420 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 EXOC2Q96KP1 924 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 MRGPRX3Q96LB0 322 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 UBL7Q96S82 380 aaPredicted RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 MKRN2Q9H000 416 aaKnown RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 NCOA5Q9HCD5 579 aaKnown RBP6.08□□□□□ -1.44
SF3A3-202ENST00000460925 STK32BQ9NY57 414 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 APEX2Q9UBZ4 518 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 ZNF451Q9Y4E5 1061 aa6.08□□□□□ -1.44
SF3A3-202ENST00000460925 SRCAPQ6ZRS2 3230 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 PTPRCP08575 1304 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 TRBV23-1A0A0A0MS06 115 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 SART1O43290 800 aaKnown RBP6.07□□□□□ -1.44
SF3A3-202ENST00000460925 GAS2O43903 313 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms